Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT4Q643R3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT4Q643R3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LPCAT4Q643R3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
LPCAT4Q643R3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT4Q643R3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.87■□□□□ 0.93
LPCAT4Q643R3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT4Q643R3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT4Q643R3 AC087742.1-201ENST00000575880 1738 ntBASIC20.87■□□□□ 0.93
LPCAT4Q643R3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT4Q643R3 ALDH1A3-203ENST00000557963 1670 ntBASIC20.86■□□□□ 0.93
LPCAT4Q643R3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
LPCAT4Q643R3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT4Q643R3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT4Q643R3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.86■□□□□ 0.93
LPCAT4Q643R3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT4Q643R3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
LPCAT4Q643R3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT4Q643R3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT4Q643R3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT4Q643R3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT4Q643R3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.86■□□□□ 0.93
LPCAT4Q643R3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT4Q643R3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LPCAT4Q643R3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.85■□□□□ 0.93
LPCAT4Q643R3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LPCAT4Q643R3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LPCAT4Q643R3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LPCAT4Q643R3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LPCAT4Q643R3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.85■□□□□ 0.93
LPCAT4Q643R3 AL022069.1-201ENST00000568025 1636 ntBASIC20.85■□□□□ 0.93
LPCAT4Q643R3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LPCAT4Q643R3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
LPCAT4Q643R3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LPCAT4Q643R3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LPCAT4Q643R3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.84■□□□□ 0.93
LPCAT4Q643R3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.84■□□□□ 0.93
LPCAT4Q643R3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LPCAT4Q643R3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LPCAT4Q643R3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LPCAT4Q643R3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LPCAT4Q643R3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.84■□□□□ 0.93
LPCAT4Q643R3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LPCAT4Q643R3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.84■□□□□ 0.93
LPCAT4Q643R3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.84■□□□□ 0.93
LPCAT4Q643R3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
LPCAT4Q643R3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.84■□□□□ 0.93
LPCAT4Q643R3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LPCAT4Q643R3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LPCAT4Q643R3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LPCAT4Q643R3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LPCAT4Q643R3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LPCAT4Q643R3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LPCAT4Q643R3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LPCAT4Q643R3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.92
LPCAT4Q643R3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LPCAT4Q643R3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LPCAT4Q643R3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LPCAT4Q643R3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
LPCAT4Q643R3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LPCAT4Q643R3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.82■□□□□ 0.92
LPCAT4Q643R3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LPCAT4Q643R3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LPCAT4Q643R3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.82■□□□□ 0.92
LPCAT4Q643R3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LPCAT4Q643R3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.82■□□□□ 0.92
LPCAT4Q643R3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LPCAT4Q643R3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
LPCAT4Q643R3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LPCAT4Q643R3 KRT18P10-201ENST00000388836 1287 ntBASIC20.81■□□□□ 0.92
LPCAT4Q643R3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.81■□□□□ 0.92
LPCAT4Q643R3 RP9P-202ENST00000450133 1212 ntBASIC20.81■□□□□ 0.92
LPCAT4Q643R3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.81■□□□□ 0.92
LPCAT4Q643R3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.81■□□□□ 0.92
LPCAT4Q643R3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LPCAT4Q643R3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.81■□□□□ 0.92
LPCAT4Q643R3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT4Q643R3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT4Q643R3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
LPCAT4Q643R3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT4Q643R3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT4Q643R3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT4Q643R3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
LPCAT4Q643R3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT4Q643R3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 298.4 ms