Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 MNN11YJL183W 1269 nt4.5□□□□□ -1.69
RPA49Q01080 VPS68YOL129W 555 nt4.5□□□□□ -1.69
RPA49Q01080 YBR126W-AYBR126W-A 207 nt4.5□□□□□ -1.69
RPA49Q01080 ARO9YHR137W 1542 nt4.5□□□□□ -1.69
RPA49Q01080 KEX1YGL203C 2190 nt4.5□□□□□ -1.69
RPA49Q01080 YGR125WYGR125W 3111 nt4.49□□□□□ -1.69
RPA49Q01080 BRE4YDL231C 3378 nt4.49□□□□□ -1.69
RPA49Q01080 BBC1YJL020C 3474 nt4.49□□□□□ -1.69
RPA49Q01080 LPP1YDR503C 825 nt4.49□□□□□ -1.69
RPA49Q01080 MRP13YGR084C 1020 nt4.49□□□□□ -1.69
RPA49Q01080 tQ(UUG)CtQ(UUG)C 72 nt4.49□□□□□ -1.69
RPA49Q01080 tQ(UUG)D1tQ(UUG)D1 72 nt4.49□□□□□ -1.69
RPA49Q01080 tQ(UUG)D2tQ(UUG)D2 72 nt4.49□□□□□ -1.69
RPA49Q01080 tQ(UUG)D3tQ(UUG)D3 72 nt4.49□□□□□ -1.69
RPA49Q01080 tQ(UUG)E1tQ(UUG)E1 72 nt4.49□□□□□ -1.69
RPA49Q01080 SAY1YGR263C 1275 nt4.49□□□□□ -1.69
RPA49Q01080 tQ(UUG)HtQ(UUG)H 72 nt4.49□□□□□ -1.69
RPA49Q01080 tQ(UUG)LtQ(UUG)L 72 nt4.49□□□□□ -1.69
RPA49Q01080 YIL089WYIL089W 618 nt4.49□□□□□ -1.69
RPA49Q01080 YIL171WYIL171W 330 nt4.49□□□□□ -1.69
RPA49Q01080 CDC48YDL126C 2508 nt4.49□□□□□ -1.69
RPA49Q01080 MSK1YNL073W 1731 nt4.49□□□□□ -1.69
RPA49Q01080 SPC105YGL093W 2754 nt4.48□□□□□ -1.69
RPA49Q01080 RPG1YBR079C 2895 nt4.48□□□□□ -1.69
RPA49Q01080 LAS1YKR063C 1509 nt4.48□□□□□ -1.69
RPA49Q01080 RPC53YDL150W 1269 nt4.48□□□□□ -1.69
RPA49Q01080 YDR274CYDR274C 372 nt4.48□□□□□ -1.69
RPA49Q01080 YGL199CYGL199C 471 nt4.48□□□□□ -1.69
RPA49Q01080 SFH5YJL145W 885 nt4.48□□□□□ -1.69
RPA49Q01080 YAR030CYAR030C 342 nt4.48□□□□□ -1.69
RPA49Q01080 YNR061CYNR061C 660 nt4.48□□□□□ -1.69
RPA49Q01080 YDC1YPL087W 954 nt4.48□□□□□ -1.69
RPA49Q01080 OAF1YAL051W 3144 nt4.48□□□□□ -1.69
RPA49Q01080 YCR023CYCR023C 1836 nt4.48□□□□□ -1.69
RPA49Q01080 MMT1YMR177W 1533 nt4.47□□□□□ -1.69
RPA49Q01080 HFA1YMR207C 6372 nt4.47□□□□□ -1.69
RPA49Q01080 SSA2YLL024C 1920 nt4.47□□□□□ -1.69
RPA49Q01080 KIN28YDL108W 921 nt4.47□□□□□ -1.69
RPA49Q01080 DIN7YDR263C 1293 nt4.47□□□□□ -1.69
RPA49Q01080 tL(UAG)JtL(UAG)J 82 nt4.47□□□□□ -1.69
RPA49Q01080 tL(UAG)L1tL(UAG)L1 82 nt4.47□□□□□ -1.69
RPA49Q01080 tL(UAG)L2tL(UAG)L2 82 nt4.47□□□□□ -1.69
RPA49Q01080 RPS4BYHR203C 786 nt4.47□□□□□ -1.69
RPA49Q01080 RPS4AYJR145C 786 nt4.47□□□□□ -1.69
RPA49Q01080 YLR462WYLR462W 609 nt4.47□□□□□ -1.69
RPA49Q01080 CDC21YOR074C 915 nt4.47□□□□□ -1.69
RPA49Q01080 SPN1YPR133C 1233 nt4.47□□□□□ -1.69
RPA49Q01080 TGL4YKR089C 2733 nt4.47□□□□□ -1.69
RPA49Q01080 HOYDL227C 1761 nt4.47□□□□□ -1.69
RPA49Q01080 YPS7YDR349C 1791 nt4.46□□□□□ -1.7
RPA49Q01080 MIH1YMR036C 1665 nt4.46□□□□□ -1.7
RPA49Q01080 YFT2YDR319C 825 nt4.46□□□□□ -1.7
RPA49Q01080 BUD25YER014C-A 462 nt4.46□□□□□ -1.7
RPA49Q01080 ZRT1YGL255W 1131 nt4.46□□□□□ -1.7
RPA49Q01080 VMA22YHR060W 546 nt4.46□□□□□ -1.7
RPA49Q01080 RDN5-1RDN5-1 121 nt4.46□□□□□ -1.7
RPA49Q01080 RDN5-6RDN5-6 121 nt4.46□□□□□ -1.7
RPA49Q01080 YOL024WYOL024W 519 nt4.46□□□□□ -1.7
RPA49Q01080 SET6YPL165C 1122 nt4.46□□□□□ -1.7
RPA49Q01080 OLE1YGL055W 1533 nt4.46□□□□□ -1.7
RPA49Q01080 BOI2YER114C 3123 nt4.46□□□□□ -1.7
RPA49Q01080 PCA1YBR295W 3651 nt4.45□□□□□ -1.7
RPA49Q01080 PEX30YLR324W 1572 nt4.45□□□□□ -1.7
RPA49Q01080 PTC1YDL006W 846 nt4.45□□□□□ -1.7
RPA49Q01080 NSE3YDR288W 912 nt4.45□□□□□ -1.7
RPA49Q01080 RPL24AYGL031C 468 nt4.45□□□□□ -1.7
RPA49Q01080 VPS69YPR087W 321 nt4.45□□□□□ -1.7
RPA49Q01080 ABF1YKL112W 2196 nt4.45□□□□□ -1.7
RPA49Q01080 ALG11YNL048W 1647 nt4.45□□□□□ -1.7
RPA49Q01080 RKM3YBR030W 1659 nt4.45□□□□□ -1.7
RPA49Q01080 KIN2YLR096W 3444 nt4.44□□□□□ -1.7
RPA49Q01080 YHL045WYHL045W 348 nt4.44□□□□□ -1.7
RPA49Q01080 YLR049CYLR049C 1287 nt4.44□□□□□ -1.7
RPA49Q01080 BLS1YLR408C 369 nt4.44□□□□□ -1.7
RPA49Q01080 PFA4YOL003C 1137 nt4.44□□□□□ -1.7
RPA49Q01080 YCL021W-AYCL021W-A 378 nt4.44□□□□□ -1.7
RPA49Q01080 FMP30YPL103C 1407 nt4.44□□□□□ -1.7
RPA49Q01080 RPN6YDL097C 1305 nt4.44□□□□□ -1.7
RPA49Q01080 PRP31YGR091W 1485 nt4.43□□□□□ -1.7
RPA49Q01080 FLC1YPL221W 2382 nt4.43□□□□□ -1.7
RPA49Q01080 SAC1YKL212W 1872 nt4.43□□□□□ -1.7
RPA49Q01080 MSE1YOL033W 1611 nt4.43□□□□□ -1.7
RPA49Q01080 TYR1YBR166C 1359 nt4.43□□□□□ -1.7
RPA49Q01080 AIM7YDR063W 450 nt4.43□□□□□ -1.7
RPA49Q01080 ENT5YDR153C 1236 nt4.43□□□□□ -1.7
RPA49Q01080 IRC6YFR043C 714 nt4.43□□□□□ -1.7
RPA49Q01080 YGR016WYGR016W 573 nt4.43□□□□□ -1.7
RPA49Q01080 PXR1YGR280C 816 nt4.43□□□□□ -1.7
RPA49Q01080 CDA2YLR308W 939 nt4.43□□□□□ -1.7
RPA49Q01080 HEK2YBL032W 1146 nt4.43□□□□□ -1.7
RPA49Q01080 SUI1YNL244C 327 nt4.43□□□□□ -1.7
RPA49Q01080 YPL025CYPL025C 558 nt4.43□□□□□ -1.7
RPA49Q01080 MFM1YPL060W 1242 nt4.43□□□□□ -1.7
RPA49Q01080 POP4YBR257W 840 nt4.43□□□□□ -1.7
RPA49Q01080 FAR10YLR238W 1437 nt4.43□□□□□ -1.7
RPA49Q01080 STV1YMR054W 2673 nt4.43□□□□□ -1.7
RPA49Q01080 MDM38YOL027C 1722 nt4.43□□□□□ -1.7
RPA49Q01080 ORC6YHR118C 1308 nt4.43□□□□□ -1.7
RPA49Q01080 VHC1YBR235W 3363 nt4.42□□□□□ -1.7
RPA49Q01080 RAD16YBR114W 2373 nt4.42□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms