Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S2P59780 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP3S2P59780 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19■□□□□ 0.63
AP3S2P59780 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S2P59780 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP3S2P59780 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S2P59780 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19■□□□□ 0.63
AP3S2P59780 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S2P59780 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S2P59780 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S2P59780 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S2P59780 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19■□□□□ 0.63
AP3S2P59780 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
AP3S2P59780 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19■□□□□ 0.63
AP3S2P59780 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19■□□□□ 0.63
AP3S2P59780 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S2P59780 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19■□□□□ 0.63
AP3S2P59780 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
AP3S2P59780 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S2P59780 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S2P59780 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
AP3S2P59780 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
AP3S2P59780 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3S2P59780 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
AP3S2P59780 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3S2P59780 AC080038.3-201ENST00000623346 1952 ntBASIC18.99■□□□□ 0.63
AP3S2P59780 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.99■□□□□ 0.63
AP3S2P59780 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3S2P59780 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.99■□□□□ 0.63
AP3S2P59780 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S2P59780 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S2P59780 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S2P59780 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.98■□□□□ 0.63
AP3S2P59780 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.98■□□□□ 0.63
AP3S2P59780 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.98■□□□□ 0.63
AP3S2P59780 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S2P59780 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S2P59780 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S2P59780 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
AP3S2P59780 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S2P59780 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.98■□□□□ 0.63
AP3S2P59780 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.97■□□□□ 0.63
AP3S2P59780 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S2P59780 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
AP3S2P59780 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S2P59780 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S2P59780 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S2P59780 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
AP3S2P59780 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3S2P59780 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3S2P59780 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S2P59780 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3S2P59780 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
AP3S2P59780 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3S2P59780 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3S2P59780 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3S2P59780 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3S2P59780 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3S2P59780 AC060814.1-201ENST00000554326 538 ntBASIC18.96■□□□□ 0.63
AP3S2P59780 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.96■□□□□ 0.63
AP3S2P59780 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.96■□□□□ 0.63
AP3S2P59780 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.96■□□□□ 0.63
AP3S2P59780 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3S2P59780 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S2P59780 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
AP3S2P59780 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S2P59780 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S2P59780 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.95■□□□□ 0.62
AP3S2P59780 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
AP3S2P59780 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S2P59780 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S2P59780 FAM99A-202ENST00000538190 1989 ntBASIC18.95■□□□□ 0.62
AP3S2P59780 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S2P59780 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.95■□□□□ 0.62
AP3S2P59780 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S2P59780 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.95■□□□□ 0.62
AP3S2P59780 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S2P59780 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S2P59780 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.94■□□□□ 0.62
AP3S2P59780 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S2P59780 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
AP3S2P59780 AC073130.3-201ENST00000624389 2278 ntBASIC18.94■□□□□ 0.62
AP3S2P59780 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
AP3S2P59780 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S2P59780 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
AP3S2P59780 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.94■□□□□ 0.62
AP3S2P59780 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S2P59780 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.94■□□□□ 0.62
AP3S2P59780 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.94■□□□□ 0.62
AP3S2P59780 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S2P59780 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
AP3S2P59780 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
AP3S2P59780 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
AP3S2P59780 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
AP3S2P59780 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S2P59780 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
AP3S2P59780 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S2P59780 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S2P59780 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S2P59780 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms