Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC9A3P48764 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC9A3P48764 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC9A3P48764 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SLC9A3P48764 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC9A3P48764 AL353803.4-201ENST00000565882 1934 ntBASIC20.21■□□□□ 0.83
SLC9A3P48764 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC9A3P48764 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC9A3P48764 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC9A3P48764 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SLC9A3P48764 MIR6722-201ENST00000617286 78 ntBASIC20.21■□□□□ 0.83
SLC9A3P48764 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC9A3P48764 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC9A3P48764 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC9A3P48764 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.2■□□□□ 0.83
SLC9A3P48764 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC9A3P48764 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC9A3P48764 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC9A3P48764 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC9A3P48764 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC9A3P48764 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC9A3P48764 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC9A3P48764 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC9A3P48764 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC9A3P48764 AC021242.3-201ENST00000607598 1377 ntBASIC20.2■□□□□ 0.82
SLC9A3P48764 AC144652.1-201ENST00000609974 1624 ntBASIC20.2■□□□□ 0.82
SLC9A3P48764 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC9A3P48764 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC9A3P48764 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC9A3P48764 AC005703.6-201ENST00000623265 1329 ntBASIC20.19■□□□□ 0.82
SLC9A3P48764 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC9A3P48764 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLC9A3P48764 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC9A3P48764 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SLC9A3P48764 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3P48764 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3P48764 PKD1P6-201ENST00000343738 4769 ntBASIC20.18■□□□□ 0.82
SLC9A3P48764 AC007375.3-201ENST00000600936 2314 ntBASIC20.18■□□□□ 0.82
SLC9A3P48764 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3P48764 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLC9A3P48764 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3P48764 BX664725.1-201ENST00000438252 379 ntBASIC20.18■□□□□ 0.82
SLC9A3P48764 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.18■□□□□ 0.82
SLC9A3P48764 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC9A3P48764 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3P48764 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLC9A3P48764 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC9A3P48764 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3P48764 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3P48764 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC9A3P48764 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC9A3P48764 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3P48764 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC9A3P48764 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SLC9A3P48764 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3P48764 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3P48764 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC9A3P48764 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC9A3P48764 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SLC9A3P48764 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SLC9A3P48764 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC9A3P48764 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3P48764 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3P48764 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3P48764 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC9A3P48764 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3P48764 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3P48764 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3P48764 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3P48764 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3P48764 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC9A3P48764 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SLC9A3P48764 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3P48764 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3P48764 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC9A3P48764 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC9A3P48764 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC9A3P48764 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC9A3P48764 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC9A3P48764 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC9A3P48764 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC9A3P48764 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC9A3P48764 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC9A3P48764 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SLC9A3P48764 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC9A3P48764 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC9A3P48764 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC9A3P48764 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC9A3P48764 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SLC9A3P48764 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC9A3P48764 SLC25A24-204ENST00000569674 2357 ntBASIC20.15■□□□□ 0.82
SLC9A3P48764 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SLC9A3P48764 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC9A3P48764 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC9A3P48764 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC9A3P48764 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC9A3P48764 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC9A3P48764 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC9A3P48764 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC9A3P48764 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms