Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YDR445CYDR445C 408 nt2.96□□□□□ -1.94
VPS55P47111 YEL074WYEL074W 339 nt2.96□□□□□ -1.94
VPS55P47111 YHR095WYHR095W 495 nt2.96□□□□□ -1.94
VPS55P47111 COX2Q0250 756 nt2.96□□□□□ -1.94
VPS55P47111 AIR1YIL079C 1083 nt2.96□□□□□ -1.94
VPS55P47111 YPR174CYPR174C 666 nt2.96□□□□□ -1.94
VPS55P47111 FPK1YNR047W 2682 nt2.96□□□□□ -1.94
VPS55P47111 MEF2YJL102W 2460 nt2.96□□□□□ -1.94
VPS55P47111 KRE5YOR336W 4098 nt2.96□□□□□ -1.94
VPS55P47111 PRP11YDL043C 801 nt2.95□□□□□ -1.94
VPS55P47111 SGN1YIR001C 753 nt2.95□□□□□ -1.94
VPS55P47111 SOP4YJL192C 705 nt2.95□□□□□ -1.94
VPS55P47111 KTR2YKR061W 1278 nt2.95□□□□□ -1.94
VPS55P47111 YOR008W-BYOR008W-B 102 nt2.95□□□□□ -1.94
VPS55P47111 PNG1YPL096W 1092 nt2.95□□□□□ -1.94
VPS55P47111 GIP4YAL031C 2283 nt2.95□□□□□ -1.94
VPS55P47111 EXO70YJL085W 1872 nt2.94□□□□□ -1.94
VPS55P47111 TDA11YHR159W 1515 nt2.94□□□□□ -1.94
VPS55P47111 YBR139WYBR139W 1527 nt2.94□□□□□ -1.94
VPS55P47111 BCK2YER167W 2556 nt2.94□□□□□ -1.94
VPS55P47111 YER076CYER076C 909 nt2.94□□□□□ -1.94
VPS55P47111 OTU1YFL044C 906 nt2.94□□□□□ -1.94
VPS55P47111 YGR139WYGR139W 339 nt2.94□□□□□ -1.94
VPS55P47111 DPH1YIL103W 1278 nt2.94□□□□□ -1.94
VPS55P47111 COX19YLL018C-A 297 nt2.94□□□□□ -1.94
VPS55P47111 SPS18YNL204C 903 nt2.94□□□□□ -1.94
VPS55P47111 OM14YBR230C 405 nt2.94□□□□□ -1.94
VPS55P47111 YGR027W-BYGR027W-B 5268 nt2.94□□□□□ -1.94
VPS55P47111 YLR227W-BYLR227W-B 5268 nt2.94□□□□□ -1.94
VPS55P47111 YPR158C-DYPR158C-D 5268 nt2.94□□□□□ -1.94
VPS55P47111 SIR2YDL042C 1689 nt2.94□□□□□ -1.94
VPS55P47111 FKH2YNL068C 2589 nt2.93□□□□□ -1.94
VPS55P47111 GAC1YOR178C 2382 nt2.93□□□□□ -1.94
VPS55P47111 RCR2YDR003W 633 nt2.93□□□□□ -1.94
VPS55P47111 SUP56tL(CAA)A 82 nt2.93□□□□□ -1.94
VPS55P47111 SUP53tL(CAA)C 82 nt2.93□□□□□ -1.94
VPS55P47111 tL(CAA)DtL(CAA)D 82 nt2.93□□□□□ -1.94
VPS55P47111 tL(CAA)G1tL(CAA)G1 82 nt2.93□□□□□ -1.94
VPS55P47111 SUP54tL(CAA)G2 82 nt2.93□□□□□ -1.94
VPS55P47111 tL(CAA)G3tL(CAA)G3 82 nt2.93□□□□□ -1.94
VPS55P47111 tL(CAA)KtL(CAA)K 82 nt2.93□□□□□ -1.94
VPS55P47111 tL(CAA)LtL(CAA)L 82 nt2.93□□□□□ -1.94
VPS55P47111 tL(CAA)MtL(CAA)M 82 nt2.93□□□□□ -1.94
VPS55P47111 tL(CAA)NtL(CAA)N 82 nt2.93□□□□□ -1.94
VPS55P47111 RPB3YIL021W 957 nt2.93□□□□□ -1.94
VPS55P47111 YOR022CYOR022C 2148 nt2.93□□□□□ -1.94
VPS55P47111 RDH54YBR073W 2877 nt2.92□□□□□ -1.94
VPS55P47111 FAT1YBR041W 2010 nt2.92□□□□□ -1.94
VPS55P47111 AAD3YCR107W 1092 nt2.92□□□□□ -1.94
VPS55P47111 CAP2YIL034C 864 nt2.92□□□□□ -1.94
VPS55P47111 PAU17YLL025W 375 nt2.92□□□□□ -1.94
VPS55P47111 YLR049CYLR049C 1287 nt2.92□□□□□ -1.94
VPS55P47111 URA4YLR420W 1095 nt2.92□□□□□ -1.94
VPS55P47111 COQ5YML110C 924 nt2.92□□□□□ -1.94
VPS55P47111 GLO4YOR040W 858 nt2.92□□□□□ -1.94
VPS55P47111 SPT6YGR116W 4356 nt2.92□□□□□ -1.94
VPS55P47111 MTC4YBR255W 2085 nt2.91□□□□□ -1.94
VPS55P47111 MNT4YNR059W 1743 nt2.91□□□□□ -1.94
VPS55P47111 YDL071CYDL071C 375 nt2.91□□□□□ -1.94
VPS55P47111 YGL108CYGL108C 423 nt2.91□□□□□ -1.94
VPS55P47111 HMX1YLR205C 954 nt2.91□□□□□ -1.94
VPS55P47111 YMR082CYMR082C 357 nt2.91□□□□□ -1.94
VPS55P47111 ATG21YPL100W 1491 nt2.9□□□□□ -1.94
VPS55P47111 YDR282CYDR282C 1245 nt2.9□□□□□ -1.95
VPS55P47111 YKE4YIL023C 1041 nt2.9□□□□□ -1.95
VPS55P47111 ORM2YLR350W 651 nt2.9□□□□□ -1.95
VPS55P47111 ARO1YDR127W 4767 nt2.9□□□□□ -1.95
VPS55P47111 ECM16YMR128W 3804 nt2.9□□□□□ -1.95
VPS55P47111 RDS1YCR106W 2499 nt2.9□□□□□ -1.95
VPS55P47111 ARX1YDR101C 1782 nt2.89□□□□□ -1.95
VPS55P47111 KRE9YJL174W 831 nt2.89□□□□□ -1.95
VPS55P47111 POP3YNL282W 588 nt2.89□□□□□ -1.95
VPS55P47111 RDL1YOR285W 420 nt2.89□□□□□ -1.95
VPS55P47111 POF1YCL047C 777 nt2.89□□□□□ -1.95
VPS55P47111 SLM5YCR024C 1479 nt2.89□□□□□ -1.95
VPS55P47111 CDC45YLR103C 1953 nt2.89□□□□□ -1.95
VPS55P47111 RNT1YMR239C 1416 nt2.88□□□□□ -1.95
VPS55P47111 MRPL7YDR237W 879 nt2.88□□□□□ -1.95
VPS55P47111 YDR274CYDR274C 372 nt2.88□□□□□ -1.95
VPS55P47111 YER134CYER134C 537 nt2.88□□□□□ -1.95
VPS55P47111 ADK2YER170W 678 nt2.88□□□□□ -1.95
VPS55P47111 YGR051CYGR051C 324 nt2.88□□□□□ -1.95
VPS55P47111 ROT1YMR200W 771 nt2.88□□□□□ -1.95
VPS55P47111 SCD6YPR129W 1050 nt2.88□□□□□ -1.95
VPS55P47111 APE2YKL157W 2859 nt2.88□□□□□ -1.95
VPS55P47111 SEG1YMR086W 2883 nt2.88□□□□□ -1.95
VPS55P47111 TAF12YDR145W 1620 nt2.87□□□□□ -1.95
VPS55P47111 MCD4YKL165C 2760 nt2.87□□□□□ -1.95
VPS55P47111 HOM2YDR158W 1098 nt2.87□□□□□ -1.95
VPS55P47111 YDR464C-AYDR464C-A 189 nt2.87□□□□□ -1.95
VPS55P47111 FOL2YGR267C 732 nt2.87□□□□□ -1.95
VPS55P47111 YLR154W-BYLR154W-B 165 nt2.87□□□□□ -1.95
VPS55P47111 YPT53YNL093W 663 nt2.87□□□□□ -1.95
VPS55P47111 PFA4YOL003C 1137 nt2.87□□□□□ -1.95
VPS55P47111 GZF3YJL110C 1656 nt2.87□□□□□ -1.95
VPS55P47111 VPS36YLR417W 1701 nt2.87□□□□□ -1.95
VPS55P47111 ATG26YLR189C 3597 nt2.87□□□□□ -1.95
VPS55P47111 SKM1YOL113W 1968 nt2.87□□□□□ -1.95
VPS55P47111 SPA2YLL021W 4401 nt2.86□□□□□ -1.95
VPS55P47111 UBP7YIL156W 3216 nt2.86□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms