Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A3P43003 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC1A3P43003 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A3P43003 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SLC1A3P43003 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A3P43003 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A3P43003 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
SLC1A3P43003 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A3P43003 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC1A3P43003 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC1A3P43003 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A3P43003 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A3P43003 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLC1A3P43003 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLC1A3P43003 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A3P43003 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC1A3P43003 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A3P43003 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A3P43003 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A3P43003 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC1A3P43003 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A3P43003 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A3P43003 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A3P43003 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SLC1A3P43003 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A3P43003 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SLC1A3P43003 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A3P43003 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC1A3P43003 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A3P43003 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A3P43003 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A3P43003 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC1A3P43003 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC1A3P43003 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.3■□□□□ 0.84
SLC1A3P43003 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A3P43003 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SLC1A3P43003 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A3P43003 ECEL1P1-201ENST00000373592 1742 ntBASIC20.3■□□□□ 0.84
SLC1A3P43003 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A3P43003 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC1A3P43003 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SLC1A3P43003 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A3P43003 AC127496.7-201ENST00000625110 1798 ntBASIC20.29■□□□□ 0.84
SLC1A3P43003 C17orf82-201ENST00000623772 1530 ntBASIC20.29■□□□□ 0.84
SLC1A3P43003 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A3P43003 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC1A3P43003 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC1A3P43003 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC1A3P43003 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC1A3P43003 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC1A3P43003 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC1A3P43003 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
SLC1A3P43003 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A3P43003 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC1A3P43003 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A3P43003 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A3P43003 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A3P43003 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A3P43003 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A3P43003 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SLC1A3P43003 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC1A3P43003 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A3P43003 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A3P43003 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
SLC1A3P43003 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A3P43003 AL356740.2-201ENST00000601559 647 ntBASIC20.28■□□□□ 0.84
SLC1A3P43003 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.28■□□□□ 0.84
SLC1A3P43003 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SLC1A3P43003 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A3P43003 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A3P43003 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A3P43003 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A3P43003 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A3P43003 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A3P43003 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A3P43003 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A3P43003 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SLC1A3P43003 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A3P43003 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A3P43003 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A3P43003 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC1A3P43003 DUX4L4-201ENST00000566884 1269 ntBASIC20.27■□□□□ 0.84
SLC1A3P43003 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A3P43003 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SLC1A3P43003 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A3P43003 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.27■□□□□ 0.83
SLC1A3P43003 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC1A3P43003 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC1A3P43003 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC1A3P43003 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A3P43003 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC1A3P43003 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A3P43003 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLC1A3P43003 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC1A3P43003 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SLC1A3P43003 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A3P43003 AL117332.1-201ENST00000622628 974 ntBASIC20.26■□□□□ 0.83
SLC1A3P43003 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A3P43003 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A3P43003 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms