Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 YML057C-AYML057C-A 390 nt4.88□□□□□ -1.63
TDP1P38319 SOL1YNR034W 966 nt4.88□□□□□ -1.63
TDP1P38319 TPT1YOL102C 693 nt4.88□□□□□ -1.63
TDP1P38319 RER2YBR002C 861 nt4.88□□□□□ -1.63
TDP1P38319 YOR032W-AYOR032W-A 201 nt4.88□□□□□ -1.63
TDP1P38319 YBR063CYBR063C 1215 nt4.88□□□□□ -1.63
TDP1P38319 ALG9YNL219C 1668 nt4.88□□□□□ -1.63
TDP1P38319 ADE3YGR204W 2841 nt4.88□□□□□ -1.63
TDP1P38319 CLF1YLR117C 2064 nt4.88□□□□□ -1.63
TDP1P38319 ZUO1YGR285C 1302 nt4.88□□□□□ -1.63
TDP1P38319 ERG4YGL012W 1422 nt4.88□□□□□ -1.63
TDP1P38319 PHO12YHR215W 1404 nt4.88□□□□□ -1.63
TDP1P38319 PHO11YAR071W 1404 nt4.88□□□□□ -1.63
TDP1P38319 TEA1YOR337W 2280 nt4.88□□□□□ -1.63
TDP1P38319 DNF2YDR093W 4839 nt4.87□□□□□ -1.63
TDP1P38319 KNH1YDL049C 807 nt4.87□□□□□ -1.63
TDP1P38319 IWR1YDL115C 1062 nt4.87□□□□□ -1.63
TDP1P38319 DET1YDR051C 1005 nt4.87□□□□□ -1.63
TDP1P38319 GAT4YIR013C 366 nt4.87□□□□□ -1.63
TDP1P38319 TTI2YJR136C 1266 nt4.87□□□□□ -1.63
TDP1P38319 YLL037WYLL037W 381 nt4.87□□□□□ -1.63
TDP1P38319 POP8YBL018C 402 nt4.87□□□□□ -1.63
TDP1P38319 PRE7YBL041W 726 nt4.87□□□□□ -1.63
TDP1P38319 SME1YOR159C 285 nt4.87□□□□□ -1.63
TDP1P38319 MGE1YOR232W 687 nt4.87□□□□□ -1.63
TDP1P38319 BBP1YPL255W 1158 nt4.87□□□□□ -1.63
TDP1P38319 PCA1YBR295W 3651 nt4.87□□□□□ -1.63
TDP1P38319 AXL2YIL140W 2472 nt4.86□□□□□ -1.63
TDP1P38319 PXA1YPL147W 2613 nt4.86□□□□□ -1.63
TDP1P38319 YCR024C-BYCR024C-B 267 nt4.86□□□□□ -1.63
TDP1P38319 YGL199CYGL199C 471 nt4.86□□□□□ -1.63
TDP1P38319 ERV29YGR284C 933 nt4.86□□□□□ -1.63
TDP1P38319 RFA3YJL173C 369 nt4.86□□□□□ -1.63
TDP1P38319 CPR7YJR032W 1182 nt4.86□□□□□ -1.63
TDP1P38319 LDB18YLL049W 540 nt4.86□□□□□ -1.63
TDP1P38319 YLR163W-AYLR163W-A 114 nt4.86□□□□□ -1.63
TDP1P38319 GAB1YLR459W 1185 nt4.86□□□□□ -1.63
TDP1P38319 VPS71YML041C 843 nt4.86□□□□□ -1.63
TDP1P38319 SUB1YMR039C 879 nt4.86□□□□□ -1.63
TDP1P38319 YMR144WYMR144W 1029 nt4.86□□□□□ -1.63
TDP1P38319 HUA2YOR284W 732 nt4.86□□□□□ -1.63
TDP1P38319 YBR053CYBR053C 1077 nt4.86□□□□□ -1.63
TDP1P38319 NUP116YMR047C 3342 nt4.86□□□□□ -1.63
TDP1P38319 MSC7YHR039C 1935 nt4.85□□□□□ -1.63
TDP1P38319 BLM10YFL007W 6432 nt4.85□□□□□ -1.63
TDP1P38319 KRE6YPR159W 2163 nt4.85□□□□□ -1.63
TDP1P38319 OCT1YKL134C 2319 nt4.85□□□□□ -1.63
TDP1P38319 MSH1YHR120W 2880 nt4.85□□□□□ -1.63
TDP1P38319 ATP16YDL004W 483 nt4.85□□□□□ -1.63
TDP1P38319 QRI7YDL104C 1224 nt4.85□□□□□ -1.63
TDP1P38319 YDR008CYDR008C 351 nt4.85□□□□□ -1.63
TDP1P38319 RPB7YDR404C 516 nt4.85□□□□□ -1.63
TDP1P38319 YDR417CYDR417C 372 nt4.85□□□□□ -1.63
TDP1P38319 PRE1YER012W 597 nt4.85□□□□□ -1.63
TDP1P38319 MLC1YGL106W 450 nt4.85□□□□□ -1.63
TDP1P38319 YIP5YGL161C 933 nt4.85□□□□□ -1.63
TDP1P38319 YHR193C-AYHR193C-A 375 nt4.85□□□□□ -1.63
TDP1P38319 YKR070WYKR070W 1059 nt4.85□□□□□ -1.63
TDP1P38319 TPP1YMR156C 717 nt4.85□□□□□ -1.63
TDP1P38319 RRT1YBL048W 312 nt4.85□□□□□ -1.63
TDP1P38319 UMP1YBR173C 447 nt4.85□□□□□ -1.63
TDP1P38319 TFC7YOR110W 1308 nt4.85□□□□□ -1.63
TDP1P38319 UBX7YBR273C 1311 nt4.85□□□□□ -1.63
TDP1P38319 FDC1YDR539W 1512 nt4.84□□□□□ -1.63
TDP1P38319 YFL064CYFL064C 525 nt4.84□□□□□ -1.63
TDP1P38319 RPT6YGL048C 1218 nt4.84□□□□□ -1.63
TDP1P38319 YGR219WYGR219W 342 nt4.84□□□□□ -1.63
TDP1P38319 tR(ACG)Q2tR(ACG)Q2 74 nt4.84□□□□□ -1.63
TDP1P38319 AIM18YHR198C 966 nt4.84□□□□□ -1.63
TDP1P38319 NSE1YLR007W 1011 nt4.84□□□□□ -1.63
TDP1P38319 HMX1YLR205C 954 nt4.84□□□□□ -1.63
TDP1P38319 RUF22RUF22 515 nt4.84□□□□□ -1.63
TDP1P38319 BUD21YOR078W 645 nt4.84□□□□□ -1.63
TDP1P38319 YPR202WYPR202W 717 nt4.84□□□□□ -1.63
TDP1P38319 APJ1YNL077W 1587 nt4.83□□□□□ -1.64
TDP1P38319 THI5YFL058W 1023 nt4.83□□□□□ -1.64
TDP1P38319 YIL102C-AYIL102C-A 228 nt4.83□□□□□ -1.64
TDP1P38319 YLR049CYLR049C 1287 nt4.83□□□□□ -1.64
TDP1P38319 YPT6YLR262C 648 nt4.83□□□□□ -1.64
TDP1P38319 YML119WYML119W 1074 nt4.83□□□□□ -1.64
TDP1P38319 YMR082CYMR082C 357 nt4.83□□□□□ -1.64
TDP1P38319 YNL050CYNL050C 813 nt4.83□□□□□ -1.64
TDP1P38319 THI12YNL332W 1023 nt4.83□□□□□ -1.64
TDP1P38319 GRE1YPL223C 507 nt4.83□□□□□ -1.64
TDP1P38319 CDC28YBR160W 897 nt4.83□□□□□ -1.64
TDP1P38319 MRPL37YBR268W 318 nt4.83□□□□□ -1.64
TDP1P38319 PRM7YDL039C 2097 nt4.83□□□□□ -1.64
TDP1P38319 SFI1YLL003W 2841 nt4.83□□□□□ -1.64
TDP1P38319 IME4YGL192W 1803 nt4.83□□□□□ -1.64
TDP1P38319 MKS1YNL076W 1755 nt4.83□□□□□ -1.64
TDP1P38319 CAB3YKL088W 1716 nt4.83□□□□□ -1.64
TDP1P38319 MNT2YGL257C 1677 nt4.83□□□□□ -1.64
TDP1P38319 NDC1YML031W 1968 nt4.82□□□□□ -1.64
TDP1P38319 RAD16YBR114W 2373 nt4.82□□□□□ -1.64
TDP1P38319 BUD8YLR353W 1812 nt4.82□□□□□ -1.64
TDP1P38319 VHC1YBR235W 3363 nt4.82□□□□□ -1.64
TDP1P38319 snR83snR83 306 nt4.82□□□□□ -1.64
TDP1P38319 NPY1YGL067W 1155 nt4.82□□□□□ -1.64
TDP1P38319 YGR079WYGR079W 1113 nt4.82□□□□□ -1.64
TDP1P38319 YHR212W-AYHR212W-A 204 nt4.82□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 29.6 ms