Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox5P35710 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.57■■□□□ 1.04
Sox5P35710 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.57■■□□□ 1.04
Sox5P35710 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox5P35710 Gm9870-201ENSMUST00000063874 645 ntBASIC21.57■■□□□ 1.04
Sox5P35710 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sox5P35710 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox5P35710 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox5P35710 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Sox5P35710 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox5P35710 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox5P35710 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sox5P35710 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox5P35710 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.56■■□□□ 1.04
Sox5P35710 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Sox5P35710 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox5P35710 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox5P35710 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox5P35710 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox5P35710 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Sox5P35710 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox5P35710 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox5P35710 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox5P35710 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox5P35710 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.55■■□□□ 1.04
Sox5P35710 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.55■■□□□ 1.04
Sox5P35710 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox5P35710 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox5P35710 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sox5P35710 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox5P35710 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Sox5P35710 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sox5P35710 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox5P35710 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox5P35710 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.54■■□□□ 1.04
Sox5P35710 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox5P35710 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Sox5P35710 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.53■■□□□ 1.04
Sox5P35710 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox5P35710 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Sox5P35710 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox5P35710 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox5P35710 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox5P35710 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox5P35710 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox5P35710 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox5P35710 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox5P35710 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sox5P35710 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sox5P35710 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox5P35710 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox5P35710 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox5P35710 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox5P35710 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox5P35710 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.51■■□□□ 1.03
Sox5P35710 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sox5P35710 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Sox5P35710 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sox5P35710 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.5■■□□□ 1.03
Sox5P35710 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox5P35710 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox5P35710 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox5P35710 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox5P35710 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.5■■□□□ 1.03
Sox5P35710 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox5P35710 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sox5P35710 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sox5P35710 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Sox5P35710 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sox5P35710 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox5P35710 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox5P35710 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.49■■□□□ 1.03
Sox5P35710 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
Sox5P35710 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox5P35710 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Sox5P35710 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.49■■□□□ 1.03
Sox5P35710 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox5P35710 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox5P35710 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox5P35710 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox5P35710 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox5P35710 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox5P35710 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox5P35710 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox5P35710 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox5P35710 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox5P35710 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox5P35710 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sox5P35710 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox5P35710 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox5P35710 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox5P35710 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox5P35710 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox5P35710 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox5P35710 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Sox5P35710 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.47■■□□□ 1.03
Sox5P35710 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.47■■□□□ 1.03
Sox5P35710 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Sox5P35710 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox5P35710 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms