Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC29.67■■■□□ 2.34
RXRBP28702 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
RXRBP28702 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RXRBP28702 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.66■■■□□ 2.34
RXRBP28702 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RXRBP28702 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC29.66■■■□□ 2.34
RXRBP28702 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC29.66■■■□□ 2.34
RXRBP28702 RARRES2P4-201ENST00000514074 484 ntBASIC29.66■■■□□ 2.34
RXRBP28702 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC29.66■■■□□ 2.34
RXRBP28702 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
RXRBP28702 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
RXRBP28702 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
RXRBP28702 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
RXRBP28702 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
RXRBP28702 AC079140.4-201ENST00000507448 529 ntBASIC29.65■■■□□ 2.34
RXRBP28702 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
RXRBP28702 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
RXRBP28702 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC29.65■■■□□ 2.34
RXRBP28702 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
RXRBP28702 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC29.64■■■□□ 2.34
RXRBP28702 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
RXRBP28702 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC29.64■■■□□ 2.34
RXRBP28702 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
RXRBP28702 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RXRBP28702 ESRRAP1-201ENST00000400596 1257 ntBASIC29.63■■■□□ 2.33
RXRBP28702 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC29.63■■■□□ 2.33
RXRBP28702 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC29.63■■■□□ 2.33
RXRBP28702 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RXRBP28702 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RXRBP28702 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RXRBP28702 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
RXRBP28702 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RXRBP28702 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RXRBP28702 PARP1-202ENST00000366792 553 ntTSL 3 BASIC29.62■■■□□ 2.33
RXRBP28702 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
RXRBP28702 UNC93B4-201ENST00000505679 747 ntBASIC29.62■■■□□ 2.33
RXRBP28702 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC29.62■■■□□ 2.33
RXRBP28702 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC29.62■■■□□ 2.33
RXRBP28702 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
RXRBP28702 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC29.62■■■□□ 2.33
RXRBP28702 CPT2-209ENST00000636935 803 ntTSL 5 BASIC29.62■■■□□ 2.33
RXRBP28702 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RXRBP28702 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RXRBP28702 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC29.61■■■□□ 2.33
RXRBP28702 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
RXRBP28702 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RXRBP28702 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC29.61■■■□□ 2.33
RXRBP28702 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RXRBP28702 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC29.61■■■□□ 2.33
RXRBP28702 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC29.61■■■□□ 2.33
RXRBP28702 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
RXRBP28702 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
RXRBP28702 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
RXRBP28702 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RXRBP28702 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC29.61■■■□□ 2.33
RXRBP28702 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
RXRBP28702 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
RXRBP28702 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
RXRBP28702 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RXRBP28702 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC29.6■■■□□ 2.33
RXRBP28702 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RXRBP28702 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
RXRBP28702 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
RXRBP28702 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
RXRBP28702 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC29.59■■■□□ 2.33
RXRBP28702 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
RXRBP28702 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC29.59■■■□□ 2.33
RXRBP28702 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC29.59■■■□□ 2.33
RXRBP28702 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC29.59■■■□□ 2.33
RXRBP28702 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC29.59■■■□□ 2.33
RXRBP28702 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC29.59■■■□□ 2.33
RXRBP28702 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
RXRBP28702 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
RXRBP28702 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC29.59■■■□□ 2.33
RXRBP28702 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RXRBP28702 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RXRBP28702 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.59■■■□□ 2.33
RXRBP28702 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC29.58■■■□□ 2.33
RXRBP28702 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
RXRBP28702 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
RXRBP28702 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
RXRBP28702 PPP1R14BP2-201ENST00000426284 444 ntBASIC29.58■■■□□ 2.33
RXRBP28702 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
RXRBP28702 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
RXRBP28702 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RXRBP28702 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RXRBP28702 STX4-202ENST00000394998 1498 ntTSL 2 BASIC29.57■■■□□ 2.32
RXRBP28702 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC29.57■■■□□ 2.32
RXRBP28702 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RXRBP28702 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
RXRBP28702 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC29.57■■■□□ 2.32
RXRBP28702 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RXRBP28702 UBE2DNL-204ENST00000602536 740 ntBASIC29.57■■■□□ 2.32
RXRBP28702 AC073912.3-201ENST00000624414 853 ntBASIC29.57■■■□□ 2.32
RXRBP28702 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC29.56■■■□□ 2.32
RXRBP28702 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
RXRBP28702 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC29.56■■■□□ 2.32
RXRBP28702 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
RXRBP28702 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC29.56■■■□□ 2.32
RXRBP28702 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC29.56■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms