Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC27.62■■■□□ 2.01
KCNA3P22001 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
KCNA3P22001 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
KCNA3P22001 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
KCNA3P22001 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
KCNA3P22001 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.61■■■□□ 2.01
KCNA3P22001 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
KCNA3P22001 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
KCNA3P22001 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC27.61■■■□□ 2.01
KCNA3P22001 TSPY6P-201ENST00000448518 926 ntBASIC27.61■■■□□ 2.01
KCNA3P22001 MDK-213ENST00000617138 635 ntTSL 2 BASIC27.61■■■□□ 2.01
KCNA3P22001 BX005040.4-201ENST00000637145 1518 ntBASIC27.61■■■□□ 2.01
KCNA3P22001 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
KCNA3P22001 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
KCNA3P22001 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
KCNA3P22001 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
KCNA3P22001 AC083906.2-201ENST00000511578 360 ntBASIC27.6■■■□□ 2.01
KCNA3P22001 CEBPA-AS1-201ENST00000592982 2198 ntBASIC27.6■■■□□ 2.01
KCNA3P22001 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.59■■■□□ 2.01
KCNA3P22001 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
KCNA3P22001 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC27.59■■■□□ 2.01
KCNA3P22001 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
KCNA3P22001 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC27.59■■■□□ 2.01
KCNA3P22001 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
KCNA3P22001 KRT18P11-201ENST00000435214 1283 ntBASIC27.59■■■□□ 2.01
KCNA3P22001 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
KCNA3P22001 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
KCNA3P22001 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
KCNA3P22001 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.58■■■□□ 2.01
KCNA3P22001 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
KCNA3P22001 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
KCNA3P22001 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC27.58■■■□□ 2.01
KCNA3P22001 AL121832.2-201ENST00000610979 668 ntBASIC27.58■■■□□ 2.01
KCNA3P22001 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC27.58■■■□□ 2.01
KCNA3P22001 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC27.58■■■□□ 2.01
KCNA3P22001 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.58■■■□□ 2.01
KCNA3P22001 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.57■■■□□ 2
KCNA3P22001 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
KCNA3P22001 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC27.57■■■□□ 2
KCNA3P22001 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC27.57■■■□□ 2
KCNA3P22001 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC27.57■■■□□ 2
KCNA3P22001 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC27.57■■■□□ 2
KCNA3P22001 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC27.57■■■□□ 2
KCNA3P22001 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC27.57■■■□□ 2
KCNA3P22001 MFSD11-216ENST00000590393 1141 ntBASIC27.57■■■□□ 2
KCNA3P22001 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC27.57■■■□□ 2
KCNA3P22001 PARP1-210ENST00000629232 477 ntTSL 5 BASIC27.57■■■□□ 2
KCNA3P22001 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC27.57■■■□□ 2
KCNA3P22001 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC27.56■■■□□ 2
KCNA3P22001 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC27.56■■■□□ 2
KCNA3P22001 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
KCNA3P22001 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC27.56■■■□□ 2
KCNA3P22001 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
KCNA3P22001 SLC7A5P2-201ENST00000553010 536 ntBASIC27.56■■■□□ 2
KCNA3P22001 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC27.56■■■□□ 2
KCNA3P22001 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC27.56■■■□□ 2
KCNA3P22001 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
KCNA3P22001 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
KCNA3P22001 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
KCNA3P22001 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC27.55■■■□□ 2
KCNA3P22001 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
KCNA3P22001 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
KCNA3P22001 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.55■■■□□ 2
KCNA3P22001 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC27.55■■■□□ 2
KCNA3P22001 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.55■■■□□ 2
KCNA3P22001 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
KCNA3P22001 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.55■■■□□ 2
KCNA3P22001 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
KCNA3P22001 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC27.55■■■□□ 2
KCNA3P22001 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
KCNA3P22001 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC27.54■■■□□ 2
KCNA3P22001 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC27.54■■■□□ 2
KCNA3P22001 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
KCNA3P22001 TESC-206ENST00000541210 936 ntTSL 3 BASIC27.54■■■□□ 2
KCNA3P22001 AL138781.1-201ENST00000566567 1274 ntBASIC27.54■■■□□ 2
KCNA3P22001 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC27.54■■■□□ 2
KCNA3P22001 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC27.54■■■□□ 2
KCNA3P22001 TFG-210ENST00000620299 1289 ntTSL 5 BASIC27.54■■■□□ 2
KCNA3P22001 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC27.54■■■□□ 2
KCNA3P22001 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
KCNA3P22001 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
KCNA3P22001 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.53■■■□□ 2
KCNA3P22001 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
KCNA3P22001 MAZ-216ENST00000616501 991 ntTSL 5 BASIC27.53■■■□□ 2
KCNA3P22001 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.52■■■□□ 2
KCNA3P22001 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC27.52■■■□□ 2
KCNA3P22001 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC27.52■■■□□ 2
KCNA3P22001 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
KCNA3P22001 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
KCNA3P22001 AC069152.1-201ENST00000438030 544 ntBASIC27.52■■■□□ 2
KCNA3P22001 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
KCNA3P22001 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC27.52■■■□□ 2
KCNA3P22001 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC27.51■■■□□ 2
KCNA3P22001 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
KCNA3P22001 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
KCNA3P22001 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
KCNA3P22001 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
KCNA3P22001 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
KCNA3P22001 METTL15-202ENST00000403099 795 ntTSL 5 BASIC27.51■■□□□ 1.99
KCNA3P22001 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC27.51■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms