Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PEPDP12955 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEPDP12955 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEPDP12955 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEPDP12955 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEPDP12955 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEPDP12955 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEPDP12955 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PEPDP12955 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
PEPDP12955 AC009102.2-201ENST00000606772 1639 ntBASIC20.38■□□□□ 0.85
PEPDP12955 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PEPDP12955 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PEPDP12955 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
PEPDP12955 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.38■□□□□ 0.85
PEPDP12955 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PEPDP12955 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PEPDP12955 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.38■□□□□ 0.85
PEPDP12955 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.38■□□□□ 0.85
PEPDP12955 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PEPDP12955 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.38■□□□□ 0.85
PEPDP12955 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.38■□□□□ 0.85
PEPDP12955 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PEPDP12955 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.38■□□□□ 0.85
PEPDP12955 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PEPDP12955 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PEPDP12955 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PEPDP12955 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PEPDP12955 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PEPDP12955 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PEPDP12955 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PEPDP12955 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.37■□□□□ 0.85
PEPDP12955 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PEPDP12955 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PEPDP12955 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.37■□□□□ 0.85
PEPDP12955 AC233723.2-201ENST00000623798 2106 ntBASIC20.37■□□□□ 0.85
PEPDP12955 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.37■□□□□ 0.85
PEPDP12955 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PEPDP12955 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PEPDP12955 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
PEPDP12955 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.36■□□□□ 0.85
PEPDP12955 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEPDP12955 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEPDP12955 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PEPDP12955 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEPDP12955 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
PEPDP12955 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEPDP12955 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
PEPDP12955 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.36■□□□□ 0.85
PEPDP12955 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.36■□□□□ 0.85
PEPDP12955 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEPDP12955 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.36■□□□□ 0.85
PEPDP12955 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PEPDP12955 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PEPDP12955 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEPDP12955 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PEPDP12955 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PEPDP12955 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PEPDP12955 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PEPDP12955 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PEPDP12955 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PEPDP12955 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PEPDP12955 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PEPDP12955 AC092171.4-201ENST00000609130 632 ntBASIC20.35■□□□□ 0.85
PEPDP12955 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.35■□□□□ 0.85
PEPDP12955 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PEPDP12955 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PEPDP12955 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.35■□□□□ 0.85
PEPDP12955 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PEPDP12955 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PEPDP12955 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PEPDP12955 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PEPDP12955 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
PEPDP12955 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PEPDP12955 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.34■□□□□ 0.85
PEPDP12955 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PEPDP12955 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PEPDP12955 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PEPDP12955 C1orf229-201ENST00000623686 2258 ntBASIC20.34■□□□□ 0.85
PEPDP12955 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PEPDP12955 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
PEPDP12955 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.33■□□□□ 0.85
PEPDP12955 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEPDP12955 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEPDP12955 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEPDP12955 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.33■□□□□ 0.85
PEPDP12955 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.33■□□□□ 0.85
PEPDP12955 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PEPDP12955 DUX4L19-201ENST00000557448 1267 ntBASIC20.33■□□□□ 0.85
PEPDP12955 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.33■□□□□ 0.85
PEPDP12955 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PEPDP12955 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.33■□□□□ 0.85
PEPDP12955 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.33■□□□□ 0.85
PEPDP12955 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PEPDP12955 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PEPDP12955 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PEPDP12955 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
PEPDP12955 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.33■□□□□ 0.84
PEPDP12955 C17orf82-201ENST00000623772 1530 ntBASIC20.32■□□□□ 0.84
PEPDP12955 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PEPDP12955 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms