Protein–RNA interactions for Protein: P0C2I6

TY1B-LR3, Transposon Ty1-LR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-LR3P0C2I6 RAD53YPL153C 2466 nt5.15□□□□□ -1.59
TY1B-LR3P0C2I6 PAP1YKR002W 1707 nt5.14□□□□□ -1.59
TY1B-LR3P0C2I6 PAN5YHR063C 1140 nt5.14□□□□□ -1.59
TY1B-LR3P0C2I6 REC104YHR157W 549 nt5.14□□□□□ -1.59
TY1B-LR3P0C2I6 IRC9YJL142C 393 nt5.14□□□□□ -1.59
TY1B-LR3P0C2I6 NAT3YPR131C 588 nt5.14□□□□□ -1.59
TY1B-LR3P0C2I6 ARR1YPR199C 885 nt5.14□□□□□ -1.59
TY1B-LR3P0C2I6 SPT15YER148W 723 nt5.13□□□□□ -1.59
TY1B-LR3P0C2I6 BUD27YFL023W 2391 nt5.13□□□□□ -1.59
TY1B-LR3P0C2I6 YGL108CYGL108C 423 nt5.13□□□□□ -1.59
TY1B-LR3P0C2I6 UTP9YHR196W 1728 nt5.13□□□□□ -1.59
TY1B-LR3P0C2I6 IRC18YJL037W 675 nt5.13□□□□□ -1.59
TY1B-LR3P0C2I6 RSE1YML049C 4086 nt5.13□□□□□ -1.59
TY1B-LR3P0C2I6 YMR317WYMR317W 3423 nt5.13□□□□□ -1.59
TY1B-LR3P0C2I6 TCB2YNL087W 3537 nt5.13□□□□□ -1.59
TY1B-LR3P0C2I6 ECM32YER176W 3366 nt5.12□□□□□ -1.59
TY1B-LR3P0C2I6 YKL050CYKL050C 2769 nt5.12□□□□□ -1.59
TY1B-LR3P0C2I6 YGR053CYGR053C 852 nt5.12□□□□□ -1.59
TY1B-LR3P0C2I6 YLR156WYLR156W 345 nt5.12□□□□□ -1.59
TY1B-LR3P0C2I6 YLR159WYLR159W 345 nt5.12□□□□□ -1.59
TY1B-LR3P0C2I6 YLR161WYLR161W 345 nt5.12□□□□□ -1.59
TY1B-LR3P0C2I6 snR42snR42 351 nt5.12□□□□□ -1.59
TY1B-LR3P0C2I6 HAL5YJL165C 2568 nt5.12□□□□□ -1.59
TY1B-LR3P0C2I6 AIM17YHL021C 1398 nt5.12□□□□□ -1.59
TY1B-LR3P0C2I6 BUB1YGR188C 3066 nt5.11□□□□□ -1.59
TY1B-LR3P0C2I6 NKP1YDR383C 717 nt5.11□□□□□ -1.59
TY1B-LR3P0C2I6 SHO1YER118C 1104 nt5.11□□□□□ -1.59
TY1B-LR3P0C2I6 tK(UUU)DtK(UUU)D 73 nt5.11□□□□□ -1.59
TY1B-LR3P0C2I6 tK(UUU)G1tK(UUU)G1 73 nt5.11□□□□□ -1.59
TY1B-LR3P0C2I6 tK(UUU)G2tK(UUU)G2 73 nt5.11□□□□□ -1.59
TY1B-LR3P0C2I6 tK(UUU)KtK(UUU)K 73 nt5.11□□□□□ -1.59
TY1B-LR3P0C2I6 tK(UUU)LtK(UUU)L 73 nt5.11□□□□□ -1.59
TY1B-LR3P0C2I6 tK(UUU)OtK(UUU)O 73 nt5.11□□□□□ -1.59
TY1B-LR3P0C2I6 tK(UUU)PtK(UUU)P 73 nt5.11□□□□□ -1.59
TY1B-LR3P0C2I6 YOR387CYOR387C 621 nt5.11□□□□□ -1.59
TY1B-LR3P0C2I6 UBP13YBL067C 2244 nt5.1□□□□□ -1.59
TY1B-LR3P0C2I6 NOP4YPL043W 2058 nt5.1□□□□□ -1.59
TY1B-LR3P0C2I6 CDC26YFR036W 375 nt5.1□□□□□ -1.59
TY1B-LR3P0C2I6 ECM34YHL043W 513 nt5.1□□□□□ -1.59
TY1B-LR3P0C2I6 YIL054WYIL054W 318 nt5.1□□□□□ -1.59
TY1B-LR3P0C2I6 RPL8BYLL045C 771 nt5.1□□□□□ -1.59
TY1B-LR3P0C2I6 YBL039W-BYBL039W-B 180 nt5.1□□□□□ -1.59
TY1B-LR3P0C2I6 TMA10YLR327C 261 nt5.09□□□□□ -1.59
TY1B-LR3P0C2I6 YBR126W-AYBR126W-A 207 nt5.09□□□□□ -1.59
TY1B-LR3P0C2I6 ATG11YPR049C 3537 nt5.09□□□□□ -1.59
TY1B-LR3P0C2I6 BMH2YDR099W 822 nt5.09□□□□□ -1.6
TY1B-LR3P0C2I6 YJL218WYJL218W 591 nt5.09□□□□□ -1.6
TY1B-LR3P0C2I6 NRM1YNR009W 750 nt5.09□□□□□ -1.6
TY1B-LR3P0C2I6 MDM12YOL009C 816 nt5.09□□□□□ -1.6
TY1B-LR3P0C2I6 PUS7YOR243C 2031 nt5.08□□□□□ -1.6
TY1B-LR3P0C2I6 ELM1YKL048C 1923 nt5.08□□□□□ -1.6
TY1B-LR3P0C2I6 MRP13YGR084C 1020 nt5.08□□□□□ -1.6
TY1B-LR3P0C2I6 PCA1YBR295W 3651 nt5.07□□□□□ -1.6
TY1B-LR3P0C2I6 PHM8YER037W 966 nt5.07□□□□□ -1.6
TY1B-LR3P0C2I6 RPL34AYER056C-A 366 nt5.07□□□□□ -1.6
TY1B-LR3P0C2I6 APC11YDL008W 498 nt5.06□□□□□ -1.6
TY1B-LR3P0C2I6 FAD1YDL045C 921 nt5.06□□□□□ -1.6
TY1B-LR3P0C2I6 YPT7YML001W 627 nt5.06□□□□□ -1.6
TY1B-LR3P0C2I6 MOT2YER068W 1764 nt5.06□□□□□ -1.6
TY1B-LR3P0C2I6 GOT1YMR292W 417 nt5.06□□□□□ -1.6
TY1B-LR3P0C2I6 YNL320WYNL320W 855 nt5.06□□□□□ -1.6
TY1B-LR3P0C2I6 TRP4YDR354W 1143 nt5.05□□□□□ -1.6
TY1B-LR3P0C2I6 ORC1YML065W 2745 nt5.05□□□□□ -1.6
TY1B-LR3P0C2I6 MEC3YLR288C 1425 nt5.05□□□□□ -1.6
TY1B-LR3P0C2I6 GAC1YOR178C 2382 nt5.04□□□□□ -1.6
TY1B-LR3P0C2I6 UTP23YOR004W 765 nt5.04□□□□□ -1.6
TY1B-LR3P0C2I6 YND1YER005W 1893 nt5.04□□□□□ -1.6
TY1B-LR3P0C2I6 SMC3YJL074C 3693 nt5.04□□□□□ -1.6
TY1B-LR3P0C2I6 KIC1YHR102W 3243 nt5.04□□□□□ -1.6
TY1B-LR3P0C2I6 HAT2YEL056W 1206 nt5.04□□□□□ -1.6
TY1B-LR3P0C2I6 MED7YOL135C 669 nt5.04□□□□□ -1.6
TY1B-LR3P0C2I6 MED4YOR174W 855 nt5.04□□□□□ -1.6
TY1B-LR3P0C2I6 PBP2YBR233W 1242 nt5.03□□□□□ -1.6
TY1B-LR3P0C2I6 VMA1YDL185W 3216 nt5.02□□□□□ -1.61
TY1B-LR3P0C2I6 DUR1,2YBR208C 5508 nt5.02□□□□□ -1.61
TY1B-LR3P0C2I6 DNA2YHR164C 4569 nt5.02□□□□□ -1.61
TY1B-LR3P0C2I6 GRX4YER174C 735 nt5.02□□□□□ -1.61
TY1B-LR3P0C2I6 RHO3YIL118W 696 nt5.02□□□□□ -1.61
TY1B-LR3P0C2I6 PRP40YKL012W 1752 nt5.02□□□□□ -1.61
TY1B-LR3P0C2I6 YHR202WYHR202W 1809 nt5.02□□□□□ -1.61
TY1B-LR3P0C2I6 tQ(UUG)BtQ(UUG)B 72 nt5.01□□□□□ -1.61
TY1B-LR3P0C2I6 YHL026CYHL026C 948 nt5.01□□□□□ -1.61
TY1B-LR3P0C2I6 YRA2YKL214C 612 nt5.01□□□□□ -1.61
TY1B-LR3P0C2I6 URA7YBL039C 1740 nt5.01□□□□□ -1.61
TY1B-LR3P0C2I6 YGR125WYGR125W 3111 nt5.01□□□□□ -1.61
TY1B-LR3P0C2I6 MRPL11YDL202W 750 nt5.01□□□□□ -1.61
TY1B-LR3P0C2I6 PRE4YFR050C 801 nt5.01□□□□□ -1.61
TY1B-LR3P0C2I6 PFK26YIL107C 2484 nt5□□□□□ -1.61
TY1B-LR3P0C2I6 SRO7YPR032W 3102 nt5□□□□□ -1.61
TY1B-LR3P0C2I6 SWP82YFL049W 1872 nt5□□□□□ -1.61
TY1B-LR3P0C2I6 SET5YHR207C 1581 nt4.99□□□□□ -1.61
TY1B-LR3P0C2I6 ECM22YLR228C 2445 nt4.99□□□□□ -1.61
TY1B-LR3P0C2I6 YKL033W-AYKL033W-A 711 nt4.99□□□□□ -1.61
TY1B-LR3P0C2I6 ENA2YDR039C 3276 nt4.99□□□□□ -1.61
TY1B-LR3P0C2I6 ENA1YDR040C 3276 nt4.99□□□□□ -1.61
TY1B-LR3P0C2I6 STI1YOR027W 1770 nt4.99□□□□□ -1.61
TY1B-LR3P0C2I6 ARO4YBR249C 1113 nt4.99□□□□□ -1.61
TY1B-LR3P0C2I6 RPL30YGL030W 318 nt4.98□□□□□ -1.61
TY1B-LR3P0C2I6 YJR020WYJR020W 333 nt4.98□□□□□ -1.61
TY1B-LR3P0C2I6 PIR1YKL164C 1026 nt4.98□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 130.3 ms