Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.84■□□□□ 0.93
MT-ND1P03886 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.84■□□□□ 0.93
MT-ND1P03886 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND1P03886 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
MT-ND1P03886 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.83■□□□□ 0.93
MT-ND1P03886 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND1P03886 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND1P03886 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND1P03886 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND1P03886 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
MT-ND1P03886 AL353803.4-201ENST00000565882 1934 ntBASIC20.83■□□□□ 0.93
MT-ND1P03886 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND1P03886 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND1P03886 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.83■□□□□ 0.93
MT-ND1P03886 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MT-ND1P03886 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
MT-ND1P03886 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MT-ND1P03886 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.83■□□□□ 0.92
MT-ND1P03886 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.82■□□□□ 0.92
MT-ND1P03886 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
MT-ND1P03886 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.82■□□□□ 0.92
MT-ND1P03886 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.82■□□□□ 0.92
MT-ND1P03886 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.82■□□□□ 0.92
MT-ND1P03886 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.82■□□□□ 0.92
MT-ND1P03886 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
MT-ND1P03886 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
MT-ND1P03886 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.81■□□□□ 0.92
MT-ND1P03886 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 AC004987.1-201ENST00000428627 508 ntBASIC20.81■□□□□ 0.92
MT-ND1P03886 ATP5G2P3-201ENST00000429083 425 ntBASIC20.81■□□□□ 0.92
MT-ND1P03886 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 BHLHE23-202ENST00000612929 1109 ntBASIC20.81■□□□□ 0.92
MT-ND1P03886 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
MT-ND1P03886 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.81■□□□□ 0.92
MT-ND1P03886 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.81■□□□□ 0.92
MT-ND1P03886 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
MT-ND1P03886 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
MT-ND1P03886 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.8■□□□□ 0.92
MT-ND1P03886 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.8■□□□□ 0.92
MT-ND1P03886 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.8■□□□□ 0.92
MT-ND1P03886 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.8■□□□□ 0.92
MT-ND1P03886 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
MT-ND1P03886 AC074183.2-201ENST00000623112 922 ntBASIC20.8■□□□□ 0.92
MT-ND1P03886 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.8■□□□□ 0.92
MT-ND1P03886 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
MT-ND1P03886 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
MT-ND1P03886 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND1P03886 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.79■□□□□ 0.92
MT-ND1P03886 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
MT-ND1P03886 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND1P03886 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND1P03886 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.79■□□□□ 0.92
MT-ND1P03886 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND1P03886 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.79■□□□□ 0.92
MT-ND1P03886 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND1P03886 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND1P03886 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
MT-ND1P03886 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
MT-ND1P03886 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MT-ND1P03886 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
MT-ND1P03886 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.78■□□□□ 0.92
MT-ND1P03886 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.78■□□□□ 0.92
MT-ND1P03886 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.78■□□□□ 0.92
MT-ND1P03886 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.78■□□□□ 0.92
MT-ND1P03886 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND1P03886 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND1P03886 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND1P03886 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
MT-ND1P03886 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.77■□□□□ 0.92
MT-ND1P03886 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
MT-ND1P03886 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
MT-ND1P03886 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.77■□□□□ 0.92
MT-ND1P03886 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms