Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.84■□□□□ 0.93
MT-ND1P03886 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.84■□□□□ 0.93
MT-ND1P03886 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND1P03886 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
MT-ND1P03886 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.83■□□□□ 0.93
MT-ND1P03886 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND1P03886 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND1P03886 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND1P03886 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND1P03886 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
MT-ND1P03886 AL353803.4-201ENST00000565882 1934 ntBASIC20.83■□□□□ 0.93
MT-ND1P03886 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND1P03886 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND1P03886 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.83■□□□□ 0.93
MT-ND1P03886 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MT-ND1P03886 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
MT-ND1P03886 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MT-ND1P03886 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.83■□□□□ 0.92
MT-ND1P03886 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.82■□□□□ 0.92
MT-ND1P03886 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
MT-ND1P03886 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.82■□□□□ 0.92
MT-ND1P03886 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.82■□□□□ 0.92
MT-ND1P03886 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.82■□□□□ 0.92
MT-ND1P03886 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.82■□□□□ 0.92
MT-ND1P03886 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
MT-ND1P03886 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND1P03886 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
MT-ND1P03886 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.81■□□□□ 0.92
MT-ND1P03886 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 AC004987.1-201ENST00000428627 508 ntBASIC20.81■□□□□ 0.92
MT-ND1P03886 ATP5G2P3-201ENST00000429083 425 ntBASIC20.81■□□□□ 0.92
MT-ND1P03886 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 BHLHE23-202ENST00000612929 1109 ntBASIC20.81■□□□□ 0.92
MT-ND1P03886 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
MT-ND1P03886 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.81■□□□□ 0.92
MT-ND1P03886 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.81■□□□□ 0.92
MT-ND1P03886 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
MT-ND1P03886 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND1P03886 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
MT-ND1P03886 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.8■□□□□ 0.92
MT-ND1P03886 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.8■□□□□ 0.92
MT-ND1P03886 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.8■□□□□ 0.92
MT-ND1P03886 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.8■□□□□ 0.92
MT-ND1P03886 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
MT-ND1P03886 AC074183.2-201ENST00000623112 922 ntBASIC20.8■□□□□ 0.92
MT-ND1P03886 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND1P03886 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.8■□□□□ 0.92
MT-ND1P03886 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
MT-ND1P03886 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
MT-ND1P03886 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND1P03886 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.79■□□□□ 0.92
MT-ND1P03886 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
MT-ND1P03886 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND1P03886 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND1P03886 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.79■□□□□ 0.92
MT-ND1P03886 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND1P03886 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.79■□□□□ 0.92
MT-ND1P03886 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND1P03886 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND1P03886 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
MT-ND1P03886 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
MT-ND1P03886 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MT-ND1P03886 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
MT-ND1P03886 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.78■□□□□ 0.92
MT-ND1P03886 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.78■□□□□ 0.92
MT-ND1P03886 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.78■□□□□ 0.92
MT-ND1P03886 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.78■□□□□ 0.92
MT-ND1P03886 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND1P03886 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND1P03886 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND1P03886 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND1P03886 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
MT-ND1P03886 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.77■□□□□ 0.92
MT-ND1P03886 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
MT-ND1P03886 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
MT-ND1P03886 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.77■□□□□ 0.92
MT-ND1P03886 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms