Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TcraP01849 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TcraP01849 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TcraP01849 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TcraP01849 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TcraP01849 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TcraP01849 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TcraP01849 Gm27502-201ENSMUST00000183495 199 ntBASIC14.36□□□□□ -0.11
TcraP01849 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TcraP01849 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.36□□□□□ -0.11
TcraP01849 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TcraP01849 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TcraP01849 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TcraP01849 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TcraP01849 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TcraP01849 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TcraP01849 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.35□□□□□ -0.11
TcraP01849 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TcraP01849 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.35□□□□□ -0.11
TcraP01849 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.35□□□□□ -0.11
TcraP01849 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TcraP01849 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.35□□□□□ -0.11
TcraP01849 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
TcraP01849 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TcraP01849 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TcraP01849 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TcraP01849 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TcraP01849 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TcraP01849 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TcraP01849 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TcraP01849 Gm7332-201ENSMUST00000118351 454 ntBASIC14.34□□□□□ -0.11
TcraP01849 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TcraP01849 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TcraP01849 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
TcraP01849 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TcraP01849 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TcraP01849 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.34□□□□□ -0.11
TcraP01849 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TcraP01849 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TcraP01849 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TcraP01849 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TcraP01849 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TcraP01849 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
TcraP01849 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TcraP01849 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TcraP01849 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.33□□□□□ -0.12
TcraP01849 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TcraP01849 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TcraP01849 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TcraP01849 Gm11175-201ENSMUST00000116172 543 ntBASIC14.33□□□□□ -0.12
TcraP01849 Gm14523-201ENSMUST00000117260 558 ntBASIC14.33□□□□□ -0.12
TcraP01849 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC14.33□□□□□ -0.12
TcraP01849 Mir6538-201ENSMUST00000183713 110 ntBASIC14.33□□□□□ -0.12
TcraP01849 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TcraP01849 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TcraP01849 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TcraP01849 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TcraP01849 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TcraP01849 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TcraP01849 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TcraP01849 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TcraP01849 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TcraP01849 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TcraP01849 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TcraP01849 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.32□□□□□ -0.12
TcraP01849 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TcraP01849 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.32□□□□□ -0.12
TcraP01849 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TcraP01849 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TcraP01849 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TcraP01849 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TcraP01849 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TcraP01849 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TcraP01849 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.31□□□□□ -0.12
TcraP01849 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TcraP01849 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TcraP01849 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TcraP01849 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
TcraP01849 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TcraP01849 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TcraP01849 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.31□□□□□ -0.12
TcraP01849 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.31□□□□□ -0.12
TcraP01849 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TcraP01849 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.31□□□□□ -0.12
TcraP01849 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
TcraP01849 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TcraP01849 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TcraP01849 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TcraP01849 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TcraP01849 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TcraP01849 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TcraP01849 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TcraP01849 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TcraP01849 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TcraP01849 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TcraP01849 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms