Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.51■□□□□ 0.39
IFNA1P01562 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
IFNA1P01562 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNA1P01562 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
IFNA1P01562 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNA1P01562 KRT18P10-201ENST00000388836 1287 ntBASIC17.51■□□□□ 0.39
IFNA1P01562 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC17.51■□□□□ 0.39
IFNA1P01562 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
IFNA1P01562 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFNA1P01562 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNA1P01562 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNA1P01562 AC026310.3-201ENST00000625186 2373 ntBASIC17.51■□□□□ 0.39
IFNA1P01562 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFNA1P01562 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNA1P01562 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNA1P01562 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNA1P01562 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNA1P01562 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNA1P01562 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNA1P01562 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNA1P01562 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNA1P01562 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.5■□□□□ 0.39
IFNA1P01562 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
IFNA1P01562 AC073130.3-201ENST00000624389 2278 ntBASIC17.5■□□□□ 0.39
IFNA1P01562 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFNA1P01562 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IFNA1P01562 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IFNA1P01562 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNA1P01562 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.49■□□□□ 0.39
IFNA1P01562 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNA1P01562 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IFNA1P01562 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
IFNA1P01562 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.49■□□□□ 0.39
IFNA1P01562 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNA1P01562 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
IFNA1P01562 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.49■□□□□ 0.39
IFNA1P01562 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNA1P01562 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNA1P01562 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNA1P01562 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNA1P01562 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNA1P01562 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNA1P01562 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNA1P01562 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.48■□□□□ 0.39
IFNA1P01562 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNA1P01562 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFNA1P01562 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
IFNA1P01562 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.48■□□□□ 0.39
IFNA1P01562 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNA1P01562 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
IFNA1P01562 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFNA1P01562 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.48■□□□□ 0.39
IFNA1P01562 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
IFNA1P01562 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNA1P01562 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
IFNA1P01562 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
IFNA1P01562 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNA1P01562 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
IFNA1P01562 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNA1P01562 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNA1P01562 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
IFNA1P01562 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNA1P01562 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNA1P01562 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
IFNA1P01562 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
IFNA1P01562 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
IFNA1P01562 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.47■□□□□ 0.39
IFNA1P01562 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNA1P01562 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
IFNA1P01562 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
IFNA1P01562 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IFNA1P01562 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNA1P01562 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.46■□□□□ 0.39
IFNA1P01562 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IFNA1P01562 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
IFNA1P01562 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNA1P01562 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
IFNA1P01562 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNA1P01562 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.46■□□□□ 0.39
IFNA1P01562 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNA1P01562 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
IFNA1P01562 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IFNA1P01562 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
IFNA1P01562 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
IFNA1P01562 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNA1P01562 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
IFNA1P01562 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms