Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
LTN1O94822 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC29.83■■■□□ 2.37
LTN1O94822 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
LTN1O94822 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
LTN1O94822 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
LTN1O94822 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
LTN1O94822 MFF-208ENST00000409616 1247 ntTSL 5 BASIC29.83■■■□□ 2.37
LTN1O94822 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC29.83■■■□□ 2.37
LTN1O94822 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC29.83■■■□□ 2.37
LTN1O94822 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC29.83■■■□□ 2.37
LTN1O94822 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC29.83■■■□□ 2.37
LTN1O94822 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC29.83■■■□□ 2.37
LTN1O94822 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC29.83■■■□□ 2.37
LTN1O94822 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
LTN1O94822 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
LTN1O94822 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
LTN1O94822 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
LTN1O94822 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
LTN1O94822 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC29.82■■■□□ 2.36
LTN1O94822 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC29.82■■■□□ 2.36
LTN1O94822 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
LTN1O94822 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.82■■■□□ 2.36
LTN1O94822 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
LTN1O94822 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC29.82■■■□□ 2.36
LTN1O94822 ID1-201ENST00000376105 1233 ntBASIC29.82■■■□□ 2.36
LTN1O94822 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
LTN1O94822 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
LTN1O94822 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC29.82■■■□□ 2.36
LTN1O94822 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC29.82■■■□□ 2.36
LTN1O94822 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC29.82■■■□□ 2.36
LTN1O94822 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
LTN1O94822 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC29.81■■■□□ 2.36
LTN1O94822 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
LTN1O94822 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
LTN1O94822 LINC01529-204ENST00000636474 1715 ntBASIC29.81■■■□□ 2.36
LTN1O94822 STX4-202ENST00000394998 1498 ntTSL 2 BASIC29.81■■■□□ 2.36
LTN1O94822 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
LTN1O94822 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC29.81■■■□□ 2.36
LTN1O94822 GXYLT1P2-201ENST00000433312 1230 ntBASIC29.81■■■□□ 2.36
LTN1O94822 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC29.81■■■□□ 2.36
LTN1O94822 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
LTN1O94822 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
LTN1O94822 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
LTN1O94822 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LTN1O94822 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LTN1O94822 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LTN1O94822 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LTN1O94822 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC29.8■■■□□ 2.36
LTN1O94822 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
LTN1O94822 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LTN1O94822 AC020928.2-201ENST00000588717 2197 ntBASIC29.8■■■□□ 2.36
LTN1O94822 SHD-204ENST00000599689 1729 ntTSL 5 BASIC29.8■■■□□ 2.36
LTN1O94822 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC29.79■■■□□ 2.36
LTN1O94822 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
LTN1O94822 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
LTN1O94822 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC29.79■■■□□ 2.36
LTN1O94822 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
LTN1O94822 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
LTN1O94822 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
LTN1O94822 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
LTN1O94822 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
LTN1O94822 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
LTN1O94822 AC016769.1-201ENST00000409132 1010 ntBASIC29.78■■■□□ 2.36
LTN1O94822 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC29.78■■■□□ 2.36
LTN1O94822 AC004687.1-201ENST00000579003 1625 ntBASIC29.78■■■□□ 2.36
LTN1O94822 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
LTN1O94822 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
LTN1O94822 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC29.78■■■□□ 2.36
LTN1O94822 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
LTN1O94822 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
LTN1O94822 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
LTN1O94822 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC29.77■■■□□ 2.36
LTN1O94822 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
LTN1O94822 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
LTN1O94822 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
LTN1O94822 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC29.77■■■□□ 2.36
LTN1O94822 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
LTN1O94822 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC29.77■■■□□ 2.36
LTN1O94822 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
LTN1O94822 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC29.76■■■□□ 2.36
LTN1O94822 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
LTN1O94822 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
LTN1O94822 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
LTN1O94822 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
LTN1O94822 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC29.76■■■□□ 2.35
LTN1O94822 RAP2CP1-201ENST00000605103 478 ntBASIC29.76■■■□□ 2.35
LTN1O94822 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
LTN1O94822 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC29.76■■■□□ 2.35
LTN1O94822 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
LTN1O94822 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC29.75■■■□□ 2.35
LTN1O94822 NTF6G-201ENST00000591094 616 ntBASIC29.75■■■□□ 2.35
LTN1O94822 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
LTN1O94822 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
LTN1O94822 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
LTN1O94822 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
LTN1O94822 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
LTN1O94822 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
LTN1O94822 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LTN1O94822 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LTN1O94822 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms