Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.35■■■□□ 2.13
ABCC4O15439 DUX4L4-201ENST00000566884 1269 ntBASIC28.35■■■□□ 2.13
ABCC4O15439 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
ABCC4O15439 AC136469.2-201ENST00000623944 1028 ntBASIC28.35■■■□□ 2.13
ABCC4O15439 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
ABCC4O15439 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
ABCC4O15439 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ABCC4O15439 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
ABCC4O15439 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ABCC4O15439 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ABCC4O15439 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC28.34■■■□□ 2.13
ABCC4O15439 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC28.34■■■□□ 2.13
ABCC4O15439 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ABCC4O15439 LINC01529-204ENST00000636474 1715 ntBASIC28.34■■■□□ 2.13
ABCC4O15439 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ABCC4O15439 ME2-208ENST00000638937 2471 ntTSL 5 BASIC28.33■■■□□ 2.13
ABCC4O15439 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ABCC4O15439 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ABCC4O15439 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC28.33■■■□□ 2.13
ABCC4O15439 HES6-206ENST00000409574 738 ntTSL 2 BASIC28.33■■■□□ 2.13
ABCC4O15439 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
ABCC4O15439 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.33■■■□□ 2.13
ABCC4O15439 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
ABCC4O15439 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
ABCC4O15439 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
ABCC4O15439 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ABCC4O15439 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ABCC4O15439 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC28.32■■■□□ 2.12
ABCC4O15439 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.32■■■□□ 2.12
ABCC4O15439 AL162430.1-201ENST00000480705 870 ntBASIC28.32■■■□□ 2.12
ABCC4O15439 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ABCC4O15439 AC241377.3-202ENST00000626088 1088 ntBASIC28.32■■■□□ 2.12
ABCC4O15439 AC241585.3-202ENST00000628937 1088 ntBASIC28.32■■■□□ 2.12
ABCC4O15439 AC245100.8-202ENST00000629247 1058 ntBASIC28.32■■■□□ 2.12
ABCC4O15439 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ABCC4O15439 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
ABCC4O15439 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ABCC4O15439 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ABCC4O15439 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ABCC4O15439 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.31■■■□□ 2.12
ABCC4O15439 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ABCC4O15439 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
ABCC4O15439 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC28.31■■■□□ 2.12
ABCC4O15439 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC28.3■■■□□ 2.12
ABCC4O15439 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCC4O15439 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC28.3■■■□□ 2.12
ABCC4O15439 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCC4O15439 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
ABCC4O15439 IRS3P-201ENST00000223076 1006 ntBASIC28.3■■■□□ 2.12
ABCC4O15439 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.3■■■□□ 2.12
ABCC4O15439 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC28.3■■■□□ 2.12
ABCC4O15439 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCC4O15439 C9orf163-202ENST00000624034 2573 ntBASIC28.3■■■□□ 2.12
ABCC4O15439 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
ABCC4O15439 RHOF-204ENST00000537265 699 ntTSL 2 BASIC28.29■■■□□ 2.12
ABCC4O15439 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
ABCC4O15439 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ABCC4O15439 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.29■■■□□ 2.12
ABCC4O15439 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC28.29■■■□□ 2.12
ABCC4O15439 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC28.28■■■□□ 2.12
ABCC4O15439 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ABCC4O15439 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ABCC4O15439 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.28■■■□□ 2.12
ABCC4O15439 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC28.28■■■□□ 2.12
ABCC4O15439 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC28.28■■■□□ 2.12
ABCC4O15439 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC28.28■■■□□ 2.12
ABCC4O15439 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC28.28■■■□□ 2.12
ABCC4O15439 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC28.28■■■□□ 2.12
ABCC4O15439 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
ABCC4O15439 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC28.27■■■□□ 2.12
ABCC4O15439 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.27■■■□□ 2.12
ABCC4O15439 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC28.27■■■□□ 2.12
ABCC4O15439 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC28.27■■■□□ 2.12
ABCC4O15439 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC28.27■■■□□ 2.12
ABCC4O15439 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.27■■■□□ 2.12
ABCC4O15439 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ABCC4O15439 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
ABCC4O15439 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.26■■■□□ 2.11
ABCC4O15439 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ABCC4O15439 JTB-203ENST00000368589 1216 ntTSL 2 BASIC28.26■■■□□ 2.11
ABCC4O15439 MIR3181-201ENST00000578512 73 ntBASIC28.26■■■□□ 2.11
ABCC4O15439 AC009086.3-201ENST00000623486 1008 ntBASIC28.26■■■□□ 2.11
ABCC4O15439 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ABCC4O15439 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC28.26■■■□□ 2.11
ABCC4O15439 AC068473.5-201ENST00000616428 2072 ntBASIC28.26■■■□□ 2.11
ABCC4O15439 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
ABCC4O15439 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC28.25■■■□□ 2.11
ABCC4O15439 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC28.25■■■□□ 2.11
ABCC4O15439 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC28.25■■■□□ 2.11
ABCC4O15439 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
ABCC4O15439 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC28.25■■■□□ 2.11
ABCC4O15439 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC28.25■■■□□ 2.11
ABCC4O15439 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
ABCC4O15439 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ABCC4O15439 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.25■■■□□ 2.11
ABCC4O15439 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.24■■■□□ 2.11
ABCC4O15439 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC28.24■■■□□ 2.11
ABCC4O15439 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.24■■■□□ 2.11
ABCC4O15439 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC28.24■■■□□ 2.11
ABCC4O15439 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms