Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC7O00311 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.74■■□□□ 1.07
CDC7O00311 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.74■■□□□ 1.07
CDC7O00311 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDC7O00311 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC7O00311 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDC7O00311 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC7O00311 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC7O00311 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDC7O00311 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDC7O00311 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.74■■□□□ 1.07
CDC7O00311 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.73■■□□□ 1.07
CDC7O00311 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC7O00311 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.73■■□□□ 1.07
CDC7O00311 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDC7O00311 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.73■■□□□ 1.07
CDC7O00311 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CDC7O00311 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.73■■□□□ 1.07
CDC7O00311 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC7O00311 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDC7O00311 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.73■■□□□ 1.07
CDC7O00311 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC7O00311 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.72■■□□□ 1.07
CDC7O00311 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC7O00311 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.72■■□□□ 1.07
CDC7O00311 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC7O00311 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC7O00311 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC7O00311 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.72■■□□□ 1.07
CDC7O00311 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC7O00311 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC7O00311 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDC7O00311 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC7O00311 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CDC7O00311 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CDC7O00311 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.71■■□□□ 1.07
CDC7O00311 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.71■■□□□ 1.07
CDC7O00311 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.71■■□□□ 1.07
CDC7O00311 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
CDC7O00311 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC7O00311 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDC7O00311 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CDC7O00311 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC7O00311 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC7O00311 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.71■■□□□ 1.07
CDC7O00311 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CDC7O00311 AC087742.1-201ENST00000575880 1738 ntBASIC21.7■■□□□ 1.06
CDC7O00311 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.7■■□□□ 1.06
CDC7O00311 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CDC7O00311 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC7O00311 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC7O00311 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDC7O00311 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
CDC7O00311 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC7O00311 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC7O00311 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC7O00311 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC7O00311 ECEL1P1-201ENST00000373592 1742 ntBASIC21.69■■□□□ 1.06
CDC7O00311 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC7O00311 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC7O00311 AC127496.7-201ENST00000625110 1798 ntBASIC21.69■■□□□ 1.06
CDC7O00311 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC7O00311 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.69■■□□□ 1.06
CDC7O00311 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC7O00311 AL117332.1-201ENST00000622628 974 ntBASIC21.69■■□□□ 1.06
CDC7O00311 AC009086.3-201ENST00000623486 1008 ntBASIC21.69■■□□□ 1.06
CDC7O00311 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC7O00311 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC7O00311 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC7O00311 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC7O00311 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC7O00311 LINC00526-201ENST00000581067 1875 ntBASIC21.69■■□□□ 1.06
CDC7O00311 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC7O00311 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC7O00311 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC7O00311 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDC7O00311 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.68■■□□□ 1.06
CDC7O00311 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.68■■□□□ 1.06
CDC7O00311 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CDC7O00311 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC7O00311 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.68■■□□□ 1.06
CDC7O00311 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC7O00311 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDC7O00311 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.67■■□□□ 1.06
CDC7O00311 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC7O00311 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.67■■□□□ 1.06
CDC7O00311 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC7O00311 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDC7O00311 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC7O00311 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC7O00311 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC7O00311 AC004687.1-201ENST00000579003 1625 ntBASIC21.66■■□□□ 1.06
CDC7O00311 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC7O00311 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDC7O00311 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.66■■□□□ 1.06
CDC7O00311 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC7O00311 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC7O00311 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDC7O00311 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CDC7O00311 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms