Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.02□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC14.02□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.02□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM256-PLSCR3K7ERE1 DUX4L28-201ENST00000623687 678 ntBASIC14.02□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.01□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC14.01□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 MIR3665-201ENST00000578708 105 ntBASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.98□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM256-PLSCR3K7ERE1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms