Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.45■□□□□ 0.22
IGKV3D-20A0A0C4DH25 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 AC139795.1-202ENST00000500444 432 ntBASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3D-20A0A0C4DH25 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3D-20A0A0C4DH25 AC092053.2-201ENST00000640557 1818 ntBASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 AC004448.1-201ENST00000458332 883 ntBASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
IGKV3D-20A0A0C4DH25 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 C11orf96-202ENST00000528572 1834 ntBASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 DUX4L18-201ENST00000553347 1267 ntBASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV3D-20A0A0C4DH25 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 AC080038.3-201ENST00000623346 1952 ntBASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 MIR4281-201ENST00000580852 62 ntBASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
IGKV3D-20A0A0C4DH25 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IGKV3D-20A0A0C4DH25 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms