Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 INO80-211ENST00000616814 4272 ntTSL 5 BASIC11.87□□□□□ -0.51
AP3S1Q92572 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 AC015909.3-201ENST00000572855 1794 ntBASIC11.87□□□□□ -0.51
AP3S1Q92572 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC11.87□□□□□ -0.51
AP3S1Q92572 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC11.87□□□□□ -0.51
AP3S1Q92572 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
AP3S1Q92572 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 AL353593.1-201ENST00000602517 3955 ntBASIC11.86□□□□□ -0.51
AP3S1Q92572 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
AP3S1Q92572 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC11.86□□□□□ -0.51
AP3S1Q92572 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
AP3S1Q92572 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
AP3S1Q92572 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC11.86□□□□□ -0.51
AP3S1Q92572 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.86□□□□□ -0.51
AP3S1Q92572 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.86□□□□□ -0.51
AP3S1Q92572 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.86□□□□□ -0.51
AP3S1Q92572 AC005722.1-201ENST00000431878 964 ntBASIC11.86□□□□□ -0.51
AP3S1Q92572 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC11.86□□□□□ -0.51
AP3S1Q92572 AC004967.1-201ENST00000453589 447 ntBASIC11.86□□□□□ -0.51
AP3S1Q92572 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.86□□□□□ -0.51
AP3S1Q92572 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.86□□□□□ -0.51
AP3S1Q92572 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.86□□□□□ -0.51
AP3S1Q92572 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.86□□□□□ -0.51
AP3S1Q92572 AL355385.1-201ENST00000606123 409 ntBASIC11.86□□□□□ -0.51
AP3S1Q92572 WFDC1-204ENST00000613603 549 ntBASIC11.86□□□□□ -0.51
AP3S1Q92572 AJ011932.1-201ENST00000621707 465 ntBASIC11.86□□□□□ -0.51
AP3S1Q92572 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
AP3S1Q92572 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC11.86□□□□□ -0.51
AP3S1Q92572 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
AP3S1Q92572 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC11.86□□□□□ -0.51
AP3S1Q92572 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC11.86□□□□□ -0.51
AP3S1Q92572 FBLN1-203ENST00000340923 2348 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
AP3S1Q92572 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 AC018629.1-201ENST00000623381 1736 ntBASIC11.86□□□□□ -0.51
AP3S1Q92572 CCT7P1-201ENST00000406551 1611 ntBASIC11.86□□□□□ -0.51
AP3S1Q92572 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
AP3S1Q92572 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC11.86□□□□□ -0.51
AP3S1Q92572 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP3S1Q92572 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
AP3S1Q92572 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
AP3S1Q92572 ENPP4-201ENST00000321037 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 ADCK1-202ENST00000341211 1972 ntTSL 2 BASIC11.85□□□□□ -0.51
AP3S1Q92572 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC11.85□□□□□ -0.51
AP3S1Q92572 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC11.85□□□□□ -0.51
AP3S1Q92572 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 SPRY4-201ENST00000344120 4938 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms