Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.77□□□□□ -0.37
SCN2BO60939 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.77□□□□□ -0.37
SCN2BO60939 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.77□□□□□ -0.37
SCN2BO60939 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.77□□□□□ -0.37
SCN2BO60939 AL132994.1-201ENST00000554098 400 ntBASIC12.77□□□□□ -0.37
SCN2BO60939 KRT8P2-201ENST00000556193 944 ntBASIC12.77□□□□□ -0.37
SCN2BO60939 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 RN7SL574P-201ENST00000581512 297 ntBASIC12.77□□□□□ -0.37
SCN2BO60939 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SCN2BO60939 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
SCN2BO60939 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.77□□□□□ -0.37
SCN2BO60939 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
SCN2BO60939 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 CAP2P1-201ENST00000557743 1390 ntBASIC12.77□□□□□ -0.37
SCN2BO60939 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.77□□□□□ -0.37
SCN2BO60939 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SCN2BO60939 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SCN2BO60939 AC092123.2-201ENST00000611189 5421 ntBASIC12.77□□□□□ -0.37
SCN2BO60939 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.77□□□□□ -0.37
SCN2BO60939 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCN2BO60939 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SCN2BO60939 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC12.76□□□□□ -0.37
SCN2BO60939 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
SCN2BO60939 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
SCN2BO60939 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.76□□□□□ -0.37
SCN2BO60939 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC12.76□□□□□ -0.37
SCN2BO60939 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.76□□□□□ -0.37
SCN2BO60939 MIR769-201ENST00000390225 118 ntBASIC12.76□□□□□ -0.37
SCN2BO60939 RPL8P2-201ENST00000430538 502 ntBASIC12.76□□□□□ -0.37
SCN2BO60939 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.76□□□□□ -0.37
SCN2BO60939 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.76□□□□□ -0.37
SCN2BO60939 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.76□□□□□ -0.37
SCN2BO60939 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.76□□□□□ -0.37
SCN2BO60939 AC025186.1-201ENST00000478174 870 ntBASIC12.76□□□□□ -0.37
SCN2BO60939 AC099548.2-209ENST00000480264 625 ntBASIC12.76□□□□□ -0.37
SCN2BO60939 RN7SL767P-201ENST00000493013 295 ntBASIC12.76□□□□□ -0.37
SCN2BO60939 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.76□□□□□ -0.37
SCN2BO60939 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.76□□□□□ -0.37
SCN2BO60939 RTN3P1-201ENST00000536295 711 ntBASIC12.76□□□□□ -0.37
SCN2BO60939 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC12.76□□□□□ -0.37
SCN2BO60939 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.76□□□□□ -0.37
SCN2BO60939 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.76□□□□□ -0.37
SCN2BO60939 MIR3619-201ENST00000579667 83 ntBASIC12.76□□□□□ -0.37
SCN2BO60939 AC092171.5-201ENST00000608012 942 ntBASIC12.76□□□□□ -0.37
SCN2BO60939 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SCN2BO60939 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SCN2BO60939 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 AC015819.3-201ENST00000624305 2674 ntBASIC12.75□□□□□ -0.37
SCN2BO60939 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SCN2BO60939 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.75□□□□□ -0.37
SCN2BO60939 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.75□□□□□ -0.37
SCN2BO60939 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC12.75□□□□□ -0.37
SCN2BO60939 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.75□□□□□ -0.37
SCN2BO60939 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 SNORD23-201ENST00000408876 110 ntBASIC12.75□□□□□ -0.37
SCN2BO60939 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 AIFM1P1-201ENST00000413342 1841 ntBASIC12.75□□□□□ -0.37
SCN2BO60939 DDC-206ENST00000431062 1620 ntTSL 5 BASIC12.75□□□□□ -0.37
SCN2BO60939 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms