Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AP000753.1-201ENST00000542805 573 ntTSL 4 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 CD63-212ENST00000552067 621 ntTSL 5 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 RN7SK-201ENST00000636484 328 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 GMNN-202ENST00000356509 1133 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 IL32-204ENST00000396887 789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 ACTG1P16-201ENST00000564713 1082 ntBASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 BPIFA1-204ENST00000618484 907 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 NR1I2-207ENST00000640105 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 AGA-201ENST00000264595 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 RPL30-201ENST00000287038 543 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 AL731577.1-201ENST00000449984 830 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 CYB561A3-213ENST00000539890 572 ntTSL 4 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 C14orf2-208ENST00000554713 1058 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 AP003969.2-201ENST00000623739 2275 ntBASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 CDC25C-202ENST00000348983 1951 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 GSKIP-203ENST00000554182 760 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 ZBTB25-203ENST00000555424 565 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 AC137936.2-201ENST00000636329 620 ntBASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 DGCR9-201ENST00000609630 2415 ntBASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 CD1C-201ENST00000368170 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS13DQ5THJ4 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 HNRNPC-204ENST00000449098 1599 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AC074389.2-201ENST00000421380 437 ntTSL 3 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AC253536.5-201ENST00000506097 347 ntBASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 SPDL1-216ENST00000629457 340 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AC012442.3-201ENST00000636053 940 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 TSN-202ENST00000409193 1436 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 ANXA13-202ENST00000419625 1469 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 MOCS1P1-201ENST00000564020 1612 ntBASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AL359881.3-201ENST00000602640 1721 ntBASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 MRPL24-201ENST00000361531 883 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 C22orf15-203ENST00000402217 829 ntAPPRIS P3 TSL 2 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AC092966.1-201ENST00000414895 526 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 PGAM1P2-201ENST00000436071 725 ntBASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AL353807.2-201ENST00000456382 220 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AC138956.2-201ENST00000512934 528 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AC092368.1-201ENST00000568014 733 ntBASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 ACAP1-204ENST00000570504 274 ntTSL 3 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 LINC01198-206ENST00000595532 1125 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms