Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
KDELR3O43731 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
KDELR3O43731 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC13.6□□□□□ -0.23
KDELR3O43731 MIR1301-201ENST00000408518 82 ntBASIC13.6□□□□□ -0.23
KDELR3O43731 OR51A9P-201ENST00000422578 911 ntBASIC13.6□□□□□ -0.23
KDELR3O43731 AL080243.1-201ENST00000423293 1060 ntBASIC13.6□□□□□ -0.23
KDELR3O43731 PSMD4P1-201ENST00000433951 1109 ntBASIC13.6□□□□□ -0.23
KDELR3O43731 VENTXP4-201ENST00000449029 958 ntBASIC13.6□□□□□ -0.23
KDELR3O43731 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC13.6□□□□□ -0.23
KDELR3O43731 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC13.6□□□□□ -0.23
KDELR3O43731 RN7SL147P-201ENST00000487345 298 ntBASIC13.6□□□□□ -0.23
KDELR3O43731 AL157792.1-201ENST00000488281 530 ntBASIC13.6□□□□□ -0.23
KDELR3O43731 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.6□□□□□ -0.23
KDELR3O43731 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.6□□□□□ -0.23
KDELR3O43731 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
KDELR3O43731 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
KDELR3O43731 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 MIR5091-201ENST00000578707 93 ntBASIC13.6□□□□□ -0.23
KDELR3O43731 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC13.6□□□□□ -0.23
KDELR3O43731 KF455155.1-201ENST00000604493 303 ntBASIC13.6□□□□□ -0.23
KDELR3O43731 AC211476.2-201ENST00000608799 708 ntBASIC13.6□□□□□ -0.23
KDELR3O43731 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.6□□□□□ -0.23
KDELR3O43731 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
KDELR3O43731 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
KDELR3O43731 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
KDELR3O43731 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 DDC-206ENST00000431062 1620 ntTSL 5 BASIC13.6□□□□□ -0.23
KDELR3O43731 AC073862.3-201ENST00000624597 1648 ntBASIC13.6□□□□□ -0.23
KDELR3O43731 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.6□□□□□ -0.23
KDELR3O43731 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
KDELR3O43731 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
KDELR3O43731 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC13.59□□□□□ -0.23
KDELR3O43731 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC13.59□□□□□ -0.23
KDELR3O43731 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.59□□□□□ -0.23
KDELR3O43731 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 AC139491.6-202ENST00000637171 2077 ntBASIC13.59□□□□□ -0.23
KDELR3O43731 LINC00567-201ENST00000569854 3409 ntBASIC13.59□□□□□ -0.23
KDELR3O43731 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.59□□□□□ -0.23
KDELR3O43731 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
KDELR3O43731 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 SIRPB3P-201ENST00000340424 1216 ntBASIC13.59□□□□□ -0.23
KDELR3O43731 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.59□□□□□ -0.23
KDELR3O43731 SURF4-203ENST00000371991 715 ntTSL 3 BASIC13.59□□□□□ -0.23
KDELR3O43731 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC13.59□□□□□ -0.23
KDELR3O43731 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
KDELR3O43731 AC010086.2-201ENST00000428616 226 ntBASIC13.59□□□□□ -0.23
KDELR3O43731 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 RPL35P1-201ENST00000450819 370 ntBASIC13.59□□□□□ -0.23
KDELR3O43731 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.59□□□□□ -0.23
KDELR3O43731 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.59□□□□□ -0.23
KDELR3O43731 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.59□□□□□ -0.23
KDELR3O43731 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC13.59□□□□□ -0.23
KDELR3O43731 AC092862.1-201ENST00000541534 533 ntBASIC13.59□□□□□ -0.23
KDELR3O43731 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
KDELR3O43731 AC091304.3-201ENST00000566500 716 ntBASIC13.59□□□□□ -0.23
KDELR3O43731 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC13.59□□□□□ -0.23
KDELR3O43731 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC13.59□□□□□ -0.23
KDELR3O43731 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC13.59□□□□□ -0.23
KDELR3O43731 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
KDELR3O43731 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.59□□□□□ -0.23
KDELR3O43731 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC13.59□□□□□ -0.23
KDELR3O43731 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 AL139823.1-201ENST00000641871 1225 ntBASIC13.59□□□□□ -0.23
KDELR3O43731 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.59□□□□□ -0.23
KDELR3O43731 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC13.59□□□□□ -0.23
KDELR3O43731 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
KDELR3O43731 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 DLX4-206ENST00000611342 1662 ntBASIC13.59□□□□□ -0.23
KDELR3O43731 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.59□□□□□ -0.23
KDELR3O43731 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC13.59□□□□□ -0.23
KDELR3O43731 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
KDELR3O43731 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.59□□□□□ -0.23
KDELR3O43731 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
KDELR3O43731 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDELR3O43731 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms