Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 OR2W2P-201ENST00000406313 909 ntBASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 AC006033.1-201ENST00000440505 426 ntBASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 AC006335.1-201ENST00000445200 547 ntBASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 RPL18AP8-201ENST00000486071 528 ntBASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 SIGLEC22P-201ENST00000599104 714 ntBASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 AC012073.1-201ENST00000606114 1108 ntBASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 AC090502.4-201ENST00000551714 1386 ntBASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 POM121L4P-202ENST00000427789 1891 ntBASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
POLR2J2Q9GZM3 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
POLR2J2Q9GZM3 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
POLR2J2Q9GZM3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
POLR2J2Q9GZM3 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
POLR2J2Q9GZM3 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
POLR2J2Q9GZM3 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.52□□□□□ -0.4
POLR2J2Q9GZM3 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
POLR2J2Q9GZM3 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
POLR2J2Q9GZM3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
POLR2J2Q9GZM3 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 AC092573.1-201ENST00000433054 884 ntBASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 DUTP3-201ENST00000450025 415 ntBASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 DNM1P51-201ENST00000558149 522 ntBASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 AC020914.3-201ENST00000594712 304 ntBASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 PDXDC2P-206ENST00000534700 1315 ntBASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
POLR2J2Q9GZM3 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms