Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SNORA74.2-201ENST00000516496 180 ntBASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 AC090095.1-201ENST00000519275 871 ntBASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 ZNF7-209ENST00000529819 513 ntTSL 4 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 AC004702.1-201ENST00000580225 195 ntTSL 5 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 MVK-202ENST00000392727 1770 ntTSL 2 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 SLC22A18AS-201ENST00000455942 697 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 AC087441.1-201ENST00000531069 301 ntBASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 AP000911.1-204ENST00000533091 571 ntTSL 4 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 AC017100.1-201ENST00000565978 1169 ntBASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 AC018697.1-201ENST00000577354 472 ntTSL 4 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 SERINC3-201ENST00000255175 1726 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 AC100774.1-201ENST00000565581 1603 ntBASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 PAX3-202ENST00000336840 2038 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 AC005587.1-201ENST00000401879 592 ntBASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 HLA-DRB9-201ENST00000449413 343 ntBASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 Metazoa_SRP.163-201ENST00000611926 277 ntBASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 uc_338.24-201ENST00000617802 182 ntBASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
VPS13DQ5THJ4 FAM230B-205ENST00000424410 1856 ntTSL 5 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 PSMC1P1-201ENST00000478110 1320 ntBASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 ANKRD20A7P-201ENST00000402318 2414 ntBASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 AL356583.3-201ENST00000412354 417 ntBASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 SLC16A7-209ENST00000549465 537 ntTSL 3 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 LINC02074-201ENST00000581028 569 ntTSL 4 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 LINC02074-202ENST00000584003 573 ntTSL 4 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 AC015911.7-201ENST00000587542 958 ntBASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 AP002986.1-203ENST00000602310 330 ntTSL 3 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 TMLHE-201ENST00000334398 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 AL935212.2-201ENST00000419207 718 ntTSL 5 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 AC092471.1-201ENST00000536497 572 ntTSL 5 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 PSMB3-211ENST00000619426 773 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 AC090952.2-201ENST00000635800 1620 ntTSL 5 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 DBI-202ENST00000355857 637 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 AC017081.1-201ENST00000420063 823 ntBASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 AP002383.2-201ENST00000545768 675 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms