Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 GH1-203ENST00000351388 685 ntTSL 2 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 CD37-203ENST00000426897 1204 ntTSL 2 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 AC010086.2-201ENST00000428616 226 ntBASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 RPS18P9-201ENST00000482817 460 ntBASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 BCRP4-201ENST00000506079 804 ntBASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 BCL2L12P1-201ENST00000508390 733 ntBASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 SRPK2P-201ENST00000523408 1100 ntBASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 PIGCP1-201ENST00000527583 895 ntBASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 AC079414.2-201ENST00000567157 1104 ntBASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 AC048382.6-201ENST00000621980 1223 ntBASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 ERG-211ENST00000453032 1595 ntTSL 2 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 VENTXP1-201ENST00000569334 2716 ntBASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 DDC-212ENST00000615193 1674 ntTSL 3 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 SNORA50C-201ENST00000408535 133 ntBASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 RPL18AP16-201ENST00000424057 531 ntBASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 AC015818.1-201ENST00000451011 244 ntBASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 NDUFB2P1-201ENST00000506966 295 ntBASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 RNA5SP420-201ENST00000516997 137 ntBASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 SNORA50.1-201ENST00000628590 135 ntBASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHKBP1Q8TBC3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SHKBP1Q8TBC3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
SHKBP1Q8TBC3 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.15□□□□□ -0.15
SHKBP1Q8TBC3 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
SHKBP1Q8TBC3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SHKBP1Q8TBC3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
SHKBP1Q8TBC3 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms