Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
AMBRA1Q9C0C7 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AMBRA1Q9C0C7 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
AMBRA1Q9C0C7 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
AMBRA1Q9C0C7 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
AMBRA1Q9C0C7 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AMBRA1Q9C0C7 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
AMBRA1Q9C0C7 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AMBRA1Q9C0C7 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AMBRA1Q9C0C7 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AMBRA1Q9C0C7 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AMBRA1Q9C0C7 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
AMBRA1Q9C0C7 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 CYP46A4P-201ENST00000414953 267 ntBASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 MIR3619-201ENST00000579667 83 ntBASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 AC016629.1-201ENST00000596579 586 ntBASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 PES1P2-201ENST00000449745 1735 ntBASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 AC009549.1-201ENST00000603468 1686 ntBASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
AMBRA1Q9C0C7 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 FLJ30679-201ENST00000624773 1980 ntBASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 MCU-204ENST00000536019 3224 ntTSL 2 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 AC092139.4-201ENST00000624318 2794 ntBASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 KRT17P5-201ENST00000332088 839 ntBASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 MIR769-201ENST00000390225 118 ntBASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms