Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC112Q8NEF3 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC112Q8NEF3 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC112Q8NEF3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC112Q8NEF3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC112Q8NEF3 RBM22P2-201ENST00000393978 1814 ntBASIC15.02■□□□□ -0
CCDC112Q8NEF3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC112Q8NEF3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC112Q8NEF3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.02■□□□□ -0
CCDC112Q8NEF3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.02■□□□□ -0
CCDC112Q8NEF3 AC007279.1-201ENST00000448547 837 ntBASIC15.02■□□□□ -0
CCDC112Q8NEF3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
CCDC112Q8NEF3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.02■□□□□ -0
CCDC112Q8NEF3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.02■□□□□ -0
CCDC112Q8NEF3 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.02■□□□□ -0
CCDC112Q8NEF3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.02■□□□□ -0
CCDC112Q8NEF3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.02■□□□□ -0
CCDC112Q8NEF3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC112Q8NEF3 AC010503.4-201ENST00000615487 688 ntBASIC15.02■□□□□ -0
CCDC112Q8NEF3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.02■□□□□ -0
CCDC112Q8NEF3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 POM121L7P-201ENST00000329949 2404 ntBASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 HNRNPLP1-201ENST00000421896 1501 ntBASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 PPP1R26P1-201ENST00000474415 3613 ntBASIC15.02□□□□□ -0.01
CCDC112Q8NEF3 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 UBTFL8-201ENST00000426903 2112 ntBASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 AHCYP2-201ENST00000430630 1300 ntBASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 FAM21FP-201ENST00000426241 1131 ntBASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 BCRP2-202ENST00000447763 634 ntBASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 HOMER2P2-201ENST00000451621 847 ntBASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 AC022494.1-201ENST00000466044 728 ntBASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 AC100850.1-201ENST00000506768 649 ntBASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 BCRP6-201ENST00000510112 632 ntBASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 BCRP7-201ENST00000511549 544 ntBASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 DNM1P51-201ENST00000558149 522 ntBASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 AC244669.2-201ENST00000612320 853 ntBASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 AL033527.4-201ENST00000641026 673 ntBASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC112Q8NEF3 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms