Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
VPS37AQ8NEZ2 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VPS37AQ8NEZ2 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VPS37AQ8NEZ2 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VPS37AQ8NEZ2 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 MIR645-201ENST00000385283 94 ntBASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 AC098934.1-203ENST00000442868 1262 ntBASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 AC114947.1-202ENST00000514136 344 ntBASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 KLF17P1-201ENST00000547105 1126 ntBASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 TEKT4P2-202ENST00000559466 1312 ntBASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 AL133338.1-201ENST00000565695 1517 ntBASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS37AQ8NEZ2 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 ELK2AP-201ENST00000392510 1007 ntBASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 RPSAP15-201ENST00000448168 861 ntBASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 LINC00563-201ENST00000566370 1400 ntBASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 HNRNPLP1-201ENST00000421896 1501 ntBASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS37AQ8NEZ2 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VPS37AQ8NEZ2 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VPS37AQ8NEZ2 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
VPS37AQ8NEZ2 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VPS37AQ8NEZ2 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
VPS37AQ8NEZ2 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
VPS37AQ8NEZ2 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
VPS37AQ8NEZ2 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
VPS37AQ8NEZ2 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13□□□□□ -0.33
VPS37AQ8NEZ2 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13□□□□□ -0.33
VPS37AQ8NEZ2 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC13□□□□□ -0.33
VPS37AQ8NEZ2 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC13□□□□□ -0.33
VPS37AQ8NEZ2 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms