Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.67□□□□□ -0.22
KDELR3O43731 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 AC079781.5-202ENST00000641784 3743 ntBASIC13.67□□□□□ -0.22
KDELR3O43731 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
KDELR3O43731 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
KDELR3O43731 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
KDELR3O43731 AL512599.1-201ENST00000430724 685 ntBASIC13.67□□□□□ -0.22
KDELR3O43731 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC13.67□□□□□ -0.22
KDELR3O43731 AC015818.1-201ENST00000451011 244 ntBASIC13.67□□□□□ -0.22
KDELR3O43731 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
KDELR3O43731 HINT1-204ENST00000506908 681 ntTSL 2 BASIC13.67□□□□□ -0.22
KDELR3O43731 AC026410.1-201ENST00000507366 1101 ntBASIC13.67□□□□□ -0.22
KDELR3O43731 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.67□□□□□ -0.22
KDELR3O43731 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC13.67□□□□□ -0.22
KDELR3O43731 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
KDELR3O43731 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
KDELR3O43731 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC13.67□□□□□ -0.22
KDELR3O43731 AC002472.4-201ENST00000641915 272 ntBASIC13.67□□□□□ -0.22
KDELR3O43731 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
KDELR3O43731 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC13.67□□□□□ -0.22
KDELR3O43731 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
KDELR3O43731 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.67□□□□□ -0.22
KDELR3O43731 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.67□□□□□ -0.22
KDELR3O43731 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KDELR3O43731 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
KDELR3O43731 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.66□□□□□ -0.22
KDELR3O43731 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC13.66□□□□□ -0.22
KDELR3O43731 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
KDELR3O43731 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
KDELR3O43731 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC13.66□□□□□ -0.22
KDELR3O43731 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
KDELR3O43731 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
KDELR3O43731 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.66□□□□□ -0.22
KDELR3O43731 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 TPI1P3-201ENST00000335020 740 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
KDELR3O43731 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
KDELR3O43731 OR2T32P-201ENST00000403423 963 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 SNORA50D-201ENST00000408059 134 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 AC097065.1-201ENST00000425737 517 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC13.66□□□□□ -0.22
KDELR3O43731 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC13.66□□□□□ -0.22
KDELR3O43731 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC13.66□□□□□ -0.22
KDELR3O43731 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC13.66□□□□□ -0.22
KDELR3O43731 ALG1L7P-201ENST00000502317 768 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.66□□□□□ -0.22
KDELR3O43731 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC13.66□□□□□ -0.22
KDELR3O43731 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC13.66□□□□□ -0.22
KDELR3O43731 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.66□□□□□ -0.22
KDELR3O43731 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.66□□□□□ -0.22
KDELR3O43731 TYMSP2-201ENST00000589501 424 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 AL160191.2-201ENST00000603975 601 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 C2orf27AP1-201ENST00000618128 586 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 AC073592.2-201ENST00000623062 780 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 SNORA50D-202ENST00000627561 132 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC13.66□□□□□ -0.22
KDELR3O43731 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 AL109809.1-201ENST00000418979 1367 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 FAM90A21P-201ENST00000510875 1396 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 FAM90A15P-201ENST00000514465 1395 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 FAM90A6P-201ENST00000515148 1394 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 FAM90A16P-201ENST00000526662 1395 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 FAM90A9P-201ENST00000527940 1395 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 FAM90A5P-201ENST00000528738 1395 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 FAM90A14P-201ENST00000530386 1395 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 FAM90A13P-201ENST00000534703 1395 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms