Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 AL157832.2-205ENST00000597245 1649 ntBASIC14.4□□□□□ -0.1
LMO3Q8TAP4 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 AOC4P-203ENST00000566825 2289 ntBASIC14.39□□□□□ -0.11
LMO3Q8TAP4 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 BAK1P2-201ENST00000532665 631 ntBASIC14.39□□□□□ -0.11
LMO3Q8TAP4 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 MT2A-202ENST00000561491 581 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 SBF1P1-201ENST00000444527 5631 ntBASIC14.39□□□□□ -0.11
LMO3Q8TAP4 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO3Q8TAP4 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 AC021305.1-201ENST00000520656 1514 ntBASIC14.38□□□□□ -0.11
LMO3Q8TAP4 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 MIR33B-201ENST00000385104 96 ntBASIC14.38□□□□□ -0.11
LMO3Q8TAP4 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 AL357563.1-201ENST00000404728 395 ntBASIC14.38□□□□□ -0.11
LMO3Q8TAP4 GGT8P-201ENST00000418938 532 ntBASIC14.38□□□□□ -0.11
LMO3Q8TAP4 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO3Q8TAP4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms