Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
USP6P35125 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
USP6P35125 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USP6P35125 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
USP6P35125 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
USP6P35125 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 SLC25A6P1-201ENST00000412123 775 ntBASIC17.81■□□□□ 0.44
USP6P35125 CLK2P1-201ENST00000416636 1294 ntBASIC17.81■□□□□ 0.44
USP6P35125 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC17.81■□□□□ 0.44
USP6P35125 AC131235.2-201ENST00000445553 1057 ntBASIC17.81■□□□□ 0.44
USP6P35125 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
USP6P35125 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC17.81■□□□□ 0.44
USP6P35125 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC17.81■□□□□ 0.44
USP6P35125 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
USP6P35125 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC17.81■□□□□ 0.44
USP6P35125 AC131274.3-201ENST00000578745 1271 ntBASIC17.81■□□□□ 0.44
USP6P35125 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC17.81■□□□□ 0.44
USP6P35125 AC022001.3-201ENST00000606330 596 ntBASIC17.81■□□□□ 0.44
USP6P35125 MIR6893-201ENST00000613458 69 ntBASIC17.81■□□□□ 0.44
USP6P35125 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
USP6P35125 AC138430.2-201ENST00000624068 504 ntBASIC17.81■□□□□ 0.44
USP6P35125 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
USP6P35125 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
USP6P35125 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.8■□□□□ 0.44
USP6P35125 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
USP6P35125 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC17.8■□□□□ 0.44
USP6P35125 AL078621.2-201ENST00000419351 698 ntBASIC17.8■□□□□ 0.44
USP6P35125 TUBB8P9-201ENST00000422534 1276 ntBASIC17.8■□□□□ 0.44
USP6P35125 TUBB8P10-201ENST00000430210 1279 ntBASIC17.8■□□□□ 0.44
USP6P35125 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 AC098934.2-202ENST00000438944 1033 ntBASIC17.8■□□□□ 0.44
USP6P35125 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 P2RX6P-202ENST00000450626 357 ntBASIC17.8■□□□□ 0.44
USP6P35125 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
USP6P35125 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC17.8■□□□□ 0.44
USP6P35125 AC080023.2-201ENST00000532615 208 ntBASIC17.8■□□□□ 0.44
USP6P35125 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
USP6P35125 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 PEBP1P1-201ENST00000554856 510 ntBASIC17.8■□□□□ 0.44
USP6P35125 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC17.8■□□□□ 0.44
USP6P35125 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 SNORD55-201ENST00000581525 80 ntBASIC17.8■□□□□ 0.44
USP6P35125 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP6P35125 BX510359.7-201ENST00000619819 630 ntBASIC17.8■□□□□ 0.44
USP6P35125 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
USP6P35125 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC17.8■□□□□ 0.44
USP6P35125 AL445250.1-201ENST00000641671 2259 ntBASIC17.8■□□□□ 0.44
USP6P35125 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP6P35125 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
USP6P35125 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
USP6P35125 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
USP6P35125 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP6P35125 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP6P35125 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP6P35125 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC17.79■□□□□ 0.44
USP6P35125 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
USP6P35125 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC17.79■□□□□ 0.44
USP6P35125 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC17.79■□□□□ 0.44
USP6P35125 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
USP6P35125 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP6P35125 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
USP6P35125 YAP1P1-201ENST00000401504 1393 ntBASIC17.79■□□□□ 0.44
USP6P35125 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP6P35125 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP6P35125 AC074019.1-201ENST00000428788 1096 ntBASIC17.79■□□□□ 0.44
USP6P35125 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC17.79■□□□□ 0.44
USP6P35125 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC17.79■□□□□ 0.44
USP6P35125 SLC25A15P1-201ENST00000456738 342 ntBASIC17.79■□□□□ 0.44
USP6P35125 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC17.79■□□□□ 0.44
USP6P35125 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
USP6P35125 RN7SL341P-201ENST00000613745 298 ntBASIC17.79■□□□□ 0.44
USP6P35125 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
USP6P35125 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP6P35125 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP6P35125 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP6P35125 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms