Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC10.08□□□□□ -0.8
NACAE9PAV3 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC10.08□□□□□ -0.8
NACAE9PAV3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC10.08□□□□□ -0.8
NACAE9PAV3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
NACAE9PAV3 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC10.08□□□□□ -0.8
NACAE9PAV3 BRD7P5-201ENST00000299197 1822 ntBASIC10.08□□□□□ -0.8
NACAE9PAV3 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC10.08□□□□□ -0.8
NACAE9PAV3 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC10.08□□□□□ -0.8
NACAE9PAV3 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC10.08□□□□□ -0.8
NACAE9PAV3 FAXC-201ENST00000389677 11508 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC10.08□□□□□ -0.8
NACAE9PAV3 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 AC091046.1-201ENST00000331871 207 ntBASIC10.08□□□□□ -0.8
NACAE9PAV3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 AL008707.1-201ENST00000422498 534 ntBASIC10.08□□□□□ -0.8
NACAE9PAV3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC10.08□□□□□ -0.8
NACAE9PAV3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC10.08□□□□□ -0.8
NACAE9PAV3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC10.08□□□□□ -0.8
NACAE9PAV3 AC073150.1-201ENST00000450406 1084 ntBASIC10.08□□□□□ -0.8
NACAE9PAV3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 AC104073.2-201ENST00000453737 312 ntBASIC10.08□□□□□ -0.8
NACAE9PAV3 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC10.08□□□□□ -0.8
NACAE9PAV3 IGLV3-15-201ENST00000518356 244 ntBASIC10.08□□□□□ -0.8
NACAE9PAV3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC10.08□□□□□ -0.8
NACAE9PAV3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 FOS-206ENST00000555347 1280 ntTSL 2 BASIC10.08□□□□□ -0.8
NACAE9PAV3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
NACAE9PAV3 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC10.08□□□□□ -0.8
NACAE9PAV3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC10.08□□□□□ -0.8
NACAE9PAV3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC10.08□□□□□ -0.8
NACAE9PAV3 RN7SL455P-201ENST00000580629 282 ntBASIC10.08□□□□□ -0.8
NACAE9PAV3 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC10.08□□□□□ -0.8
NACAE9PAV3 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
NACAE9PAV3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 AL031719.1-201ENST00000623365 2587 ntBASIC10.08□□□□□ -0.8
NACAE9PAV3 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC10.08□□□□□ -0.8
NACAE9PAV3 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC10.08□□□□□ -0.8
NACAE9PAV3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
NACAE9PAV3 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
NACAE9PAV3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC10.08□□□□□ -0.8
NACAE9PAV3 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
NACAE9PAV3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
NACAE9PAV3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 SCN5A-205ENST00000423572 8362 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
NACAE9PAV3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC10.07□□□□□ -0.8
NACAE9PAV3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC10.07□□□□□ -0.8
NACAE9PAV3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
NACAE9PAV3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC10.07□□□□□ -0.8
NACAE9PAV3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 AC078875.1-201ENST00000431907 724 ntBASIC10.07□□□□□ -0.8
NACAE9PAV3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC10.07□□□□□ -0.8
NACAE9PAV3 AC024681.1-201ENST00000521917 487 ntBASIC10.07□□□□□ -0.8
NACAE9PAV3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 RN7SL190P-201ENST00000582519 257 ntBASIC10.07□□□□□ -0.8
NACAE9PAV3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
NACAE9PAV3 MEG3_2.1-201ENST00000611456 105 ntBASIC10.07□□□□□ -0.8
NACAE9PAV3 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms