Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.15■■□□□ 1.78
SNCAIPQ9Y6H5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
SNCAIPQ9Y6H5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SNCAIPQ9Y6H5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNCAIPQ9Y6H5 RAP2CP1-201ENST00000605103 478 ntBASIC26.15■■□□□ 1.78
SNCAIPQ9Y6H5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
SNCAIPQ9Y6H5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNCAIPQ9Y6H5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SNCAIPQ9Y6H5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.78
SNCAIPQ9Y6H5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.14■■□□□ 1.78
SNCAIPQ9Y6H5 AC080038.1-201ENST00000611274 1154 ntBASIC26.14■■□□□ 1.78
SNCAIPQ9Y6H5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
SNCAIPQ9Y6H5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SNCAIPQ9Y6H5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.13■■□□□ 1.77
SNCAIPQ9Y6H5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SNCAIPQ9Y6H5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
SNCAIPQ9Y6H5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNCAIPQ9Y6H5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNCAIPQ9Y6H5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNCAIPQ9Y6H5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNCAIPQ9Y6H5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNCAIPQ9Y6H5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNCAIPQ9Y6H5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNCAIPQ9Y6H5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNCAIPQ9Y6H5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNCAIPQ9Y6H5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SNCAIPQ9Y6H5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC26.12■■□□□ 1.77
SNCAIPQ9Y6H5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.12■■□□□ 1.77
SNCAIPQ9Y6H5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.12■■□□□ 1.77
SNCAIPQ9Y6H5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.11■■□□□ 1.77
SNCAIPQ9Y6H5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.11■■□□□ 1.77
SNCAIPQ9Y6H5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.11■■□□□ 1.77
SNCAIPQ9Y6H5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNCAIPQ9Y6H5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNCAIPQ9Y6H5 TPRG1LP1-201ENST00000598702 760 ntBASIC26.11■■□□□ 1.77
SNCAIPQ9Y6H5 AC022211.4-201ENST00000625094 2161 ntBASIC26.11■■□□□ 1.77
SNCAIPQ9Y6H5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNCAIPQ9Y6H5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.11■■□□□ 1.77
SNCAIPQ9Y6H5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNCAIPQ9Y6H5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.11■■□□□ 1.77
SNCAIPQ9Y6H5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNCAIPQ9Y6H5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNCAIPQ9Y6H5 AC144652.1-201ENST00000609974 1624 ntBASIC26.1■■□□□ 1.77
SNCAIPQ9Y6H5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SNCAIPQ9Y6H5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNCAIPQ9Y6H5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.1■■□□□ 1.77
SNCAIPQ9Y6H5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.1■■□□□ 1.77
SNCAIPQ9Y6H5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.1■■□□□ 1.77
SNCAIPQ9Y6H5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNCAIPQ9Y6H5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNCAIPQ9Y6H5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNCAIPQ9Y6H5 LINC01529-204ENST00000636474 1715 ntBASIC26.09■■□□□ 1.77
SNCAIPQ9Y6H5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.09■■□□□ 1.77
SNCAIPQ9Y6H5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.09■■□□□ 1.77
SNCAIPQ9Y6H5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.09■■□□□ 1.77
SNCAIPQ9Y6H5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.09■■□□□ 1.77
SNCAIPQ9Y6H5 AP003733.4-201ENST00000623785 1697 ntBASIC26.09■■□□□ 1.77
SNCAIPQ9Y6H5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNCAIPQ9Y6H5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
SNCAIPQ9Y6H5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNCAIPQ9Y6H5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNCAIPQ9Y6H5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
SNCAIPQ9Y6H5 CDCA4P2-201ENST00000441182 718 ntBASIC26.08■■□□□ 1.77
SNCAIPQ9Y6H5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNCAIPQ9Y6H5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SNCAIPQ9Y6H5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SNCAIPQ9Y6H5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SNCAIPQ9Y6H5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SNCAIPQ9Y6H5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.07■■□□□ 1.76
SNCAIPQ9Y6H5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SNCAIPQ9Y6H5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.07■■□□□ 1.76
SNCAIPQ9Y6H5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.07■■□□□ 1.76
SNCAIPQ9Y6H5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.07■■□□□ 1.76
SNCAIPQ9Y6H5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.07■■□□□ 1.76
SNCAIPQ9Y6H5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.07■■□□□ 1.76
SNCAIPQ9Y6H5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.07■■□□□ 1.76
SNCAIPQ9Y6H5 AC073111.5-205ENST00000641717 521 ntBASIC26.07■■□□□ 1.76
SNCAIPQ9Y6H5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SNCAIPQ9Y6H5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 AC137761.2-201ENST00000561729 223 ntBASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 AC145350.3-201ENST00000569033 163 ntBASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.06■■□□□ 1.76
SNCAIPQ9Y6H5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.05■■□□□ 1.76
SNCAIPQ9Y6H5 GXYLT1P5-201ENST00000614548 1189 ntBASIC26.05■■□□□ 1.76
SNCAIPQ9Y6H5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNCAIPQ9Y6H5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.05■■□□□ 1.76
SNCAIPQ9Y6H5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNCAIPQ9Y6H5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.05■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms