Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 MIR4466-201ENST00000606121 54 ntBASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB4Q9Y5E5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
PCDHB4Q9Y5E5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
PCDHB4Q9Y5E5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB4Q9Y5E5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PCDHB4Q9Y5E5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PCDHB4Q9Y5E5 SRD5A1P1-201ENST00000442297 786 ntBASIC23.79■■□□□ 1.4
PCDHB4Q9Y5E5 AC131281.2-201ENST00000520478 145 ntBASIC23.79■■□□□ 1.4
PCDHB4Q9Y5E5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.79■■□□□ 1.4
PCDHB4Q9Y5E5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHB4Q9Y5E5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB4Q9Y5E5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDHB4Q9Y5E5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 AC133561.1-201ENST00000568600 2415 ntBASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 AC099791.2-201ENST00000605725 427 ntBASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 AC241377.3-202ENST00000626088 1088 ntBASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 AC241585.3-202ENST00000628937 1088 ntBASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 AC245100.8-202ENST00000629247 1058 ntBASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.78■■□□□ 1.4
PCDHB4Q9Y5E5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB4Q9Y5E5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB4Q9Y5E5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PCDHB4Q9Y5E5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHB4Q9Y5E5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.77■■□□□ 1.4
PCDHB4Q9Y5E5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHB4Q9Y5E5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB4Q9Y5E5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.77■■□□□ 1.4
PCDHB4Q9Y5E5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
PCDHB4Q9Y5E5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB4Q9Y5E5 AC009086.3-201ENST00000623486 1008 ntBASIC23.77■■□□□ 1.4
PCDHB4Q9Y5E5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB4Q9Y5E5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB4Q9Y5E5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PCDHB4Q9Y5E5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB4Q9Y5E5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHB4Q9Y5E5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHB4Q9Y5E5 AC006455.2-201ENST00000429931 906 ntBASIC23.76■■□□□ 1.39
PCDHB4Q9Y5E5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHB4Q9Y5E5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PCDHB4Q9Y5E5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.76■■□□□ 1.39
PCDHB4Q9Y5E5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHB4Q9Y5E5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB4Q9Y5E5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PCDHB4Q9Y5E5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHB4Q9Y5E5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB4Q9Y5E5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHB4Q9Y5E5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB4Q9Y5E5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PCDHB4Q9Y5E5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHB4Q9Y5E5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB4Q9Y5E5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB4Q9Y5E5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PCDHB4Q9Y5E5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB4Q9Y5E5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB4Q9Y5E5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB4Q9Y5E5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB4Q9Y5E5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB4Q9Y5E5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHB4Q9Y5E5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB4Q9Y5E5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB4Q9Y5E5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB4Q9Y5E5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 C1orf229-201ENST00000623686 2258 ntBASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
PCDHB4Q9Y5E5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB4Q9Y5E5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms