Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRCH1Q9Y2L9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRCH1Q9Y2L9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.09■□□□□ 0.97
LRCH1Q9Y2L9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LRCH1Q9Y2L9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LRCH1Q9Y2L9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRCH1Q9Y2L9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRCH1Q9Y2L9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LRCH1Q9Y2L9 FAM99A-202ENST00000538190 1989 ntBASIC21.08■□□□□ 0.97
LRCH1Q9Y2L9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRCH1Q9Y2L9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.08■□□□□ 0.97
LRCH1Q9Y2L9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRCH1Q9Y2L9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRCH1Q9Y2L9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.08■□□□□ 0.97
LRCH1Q9Y2L9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRCH1Q9Y2L9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRCH1Q9Y2L9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRCH1Q9Y2L9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRCH1Q9Y2L9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRCH1Q9Y2L9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 AC080038.3-201ENST00000623346 1952 ntBASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 AC148477.6-201ENST00000623746 465 ntBASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 AL391422.3-201ENST00000603791 2761 ntBASIC21.07■□□□□ 0.96
LRCH1Q9Y2L9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.06■□□□□ 0.96
LRCH1Q9Y2L9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRCH1Q9Y2L9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRCH1Q9Y2L9 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.06■□□□□ 0.96
LRCH1Q9Y2L9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.06■□□□□ 0.96
LRCH1Q9Y2L9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRCH1Q9Y2L9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LRCH1Q9Y2L9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LRCH1Q9Y2L9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRCH1Q9Y2L9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.05■□□□□ 0.96
LRCH1Q9Y2L9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRCH1Q9Y2L9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LRCH1Q9Y2L9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRCH1Q9Y2L9 HSD17B1P1-201ENST00000590052 955 ntBASIC21.05■□□□□ 0.96
LRCH1Q9Y2L9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRCH1Q9Y2L9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.05■□□□□ 0.96
LRCH1Q9Y2L9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRCH1Q9Y2L9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRCH1Q9Y2L9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 AL359258.2-201ENST00000564063 1566 ntBASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 AL157384.1-201ENST00000445995 2473 ntBASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 AL161729.1-201ENST00000604104 1402 ntBASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
LRCH1Q9Y2L9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRCH1Q9Y2L9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRCH1Q9Y2L9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRCH1Q9Y2L9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
LRCH1Q9Y2L9 AC079630.1-202ENST00000618127 1840 ntBASIC21.02■□□□□ 0.96
LRCH1Q9Y2L9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.02■□□□□ 0.96
LRCH1Q9Y2L9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRCH1Q9Y2L9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRCH1Q9Y2L9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRCH1Q9Y2L9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LRCH1Q9Y2L9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRCH1Q9Y2L9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms