Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.04■□□□□ 0.32
NOTCH3Q9UM47 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.04■□□□□ 0.32
NOTCH3Q9UM47 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH3Q9UM47 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.04■□□□□ 0.32
NOTCH3Q9UM47 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH3Q9UM47 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH3Q9UM47 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NOTCH3Q9UM47 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH3Q9UM47 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NOTCH3Q9UM47 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NOTCH3Q9UM47 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NOTCH3Q9UM47 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH3Q9UM47 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NOTCH3Q9UM47 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH3Q9UM47 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH3Q9UM47 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH3Q9UM47 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NOTCH3Q9UM47 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH3Q9UM47 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NOTCH3Q9UM47 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH3Q9UM47 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH3Q9UM47 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH3Q9UM47 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH3Q9UM47 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NOTCH3Q9UM47 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH3Q9UM47 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NOTCH3Q9UM47 IGHV3-19-201ENST00000521488 291 ntBASIC17.02■□□□□ 0.32
NOTCH3Q9UM47 NTF6G-201ENST00000591094 616 ntBASIC17.02■□□□□ 0.32
NOTCH3Q9UM47 MIR6089-201ENST00000616698 64 ntBASIC17.02■□□□□ 0.32
NOTCH3Q9UM47 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH3Q9UM47 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH3Q9UM47 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NOTCH3Q9UM47 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
NOTCH3Q9UM47 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.02■□□□□ 0.31
NOTCH3Q9UM47 AC004911.1-201ENST00000416316 871 ntBASIC17.02■□□□□ 0.31
NOTCH3Q9UM47 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NOTCH3Q9UM47 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.01■□□□□ 0.31
NOTCH3Q9UM47 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17■□□□□ 0.31
NOTCH3Q9UM47 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17■□□□□ 0.31
NOTCH3Q9UM47 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NOTCH3Q9UM47 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17■□□□□ 0.31
NOTCH3Q9UM47 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH3Q9UM47 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17■□□□□ 0.31
NOTCH3Q9UM47 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17■□□□□ 0.31
NOTCH3Q9UM47 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17■□□□□ 0.31
NOTCH3Q9UM47 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH3Q9UM47 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH3Q9UM47 RAP2CP1-201ENST00000605103 478 ntBASIC17■□□□□ 0.31
NOTCH3Q9UM47 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH3Q9UM47 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH3Q9UM47 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH3Q9UM47 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH3Q9UM47 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17■□□□□ 0.31
NOTCH3Q9UM47 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NOTCH3Q9UM47 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17■□□□□ 0.31
NOTCH3Q9UM47 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NOTCH3Q9UM47 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 MIR6084-201ENST00000622012 110 ntBASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 HLA-L-211ENST00000482052 1765 ntBASIC16.99■□□□□ 0.31
NOTCH3Q9UM47 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH3Q9UM47 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms