Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9N2K0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Q9N2K0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9N2K0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9N2K0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.6■□□□□ 0.57
Q9N2K0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.6■□□□□ 0.57
Q9N2K0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Q9N2K0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Q9N2K0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Q9N2K0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Q9N2K0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9N2K0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9N2K0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9N2K0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.59■□□□□ 0.57
Q9N2K0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9N2K0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Q9N2K0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Q9N2K0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
Q9N2K0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Q9N2K0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Q9N2K0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9N2K0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Q9N2K0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.59■□□□□ 0.57
Q9N2K0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9N2K0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9N2K0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Q9N2K0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q9N2K0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q9N2K0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q9N2K0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q9N2K0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Q9N2K0 AC103724.3-201ENST00000564481 992 ntBASIC18.58■□□□□ 0.56
Q9N2K0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.58■□□□□ 0.56
Q9N2K0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.58■□□□□ 0.56
Q9N2K0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Q9N2K0 AC137767.1-201ENST00000602918 1920 ntBASIC18.58■□□□□ 0.56
Q9N2K0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q9N2K0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.58■□□□□ 0.56
Q9N2K0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.58■□□□□ 0.56
Q9N2K0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Q9N2K0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Q9N2K0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Q9N2K0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9N2K0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9N2K0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Q9N2K0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9N2K0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.57■□□□□ 0.56
Q9N2K0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Q9N2K0 AL033527.3-201ENST00000566366 1196 ntBASIC18.57■□□□□ 0.56
Q9N2K0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.57■□□□□ 0.56
Q9N2K0 AC137630.3-201ENST00000607245 391 ntBASIC18.57■□□□□ 0.56
Q9N2K0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9N2K0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Q9N2K0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.57■□□□□ 0.56
Q9N2K0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Q9N2K0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9N2K0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Q9N2K0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.57■□□□□ 0.56
Q9N2K0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.56■□□□□ 0.56
Q9N2K0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9N2K0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Q9N2K0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Q9N2K0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Q9N2K0 YBX1P4-201ENST00000392794 808 ntBASIC18.56■□□□□ 0.56
Q9N2K0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.56■□□□□ 0.56
Q9N2K0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9N2K0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9N2K0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Q9N2K0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9N2K0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9N2K0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q9N2K0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9N2K0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
Q9N2K0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q9N2K0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9N2K0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.55■□□□□ 0.56
Q9N2K0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.55■□□□□ 0.56
Q9N2K0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q9N2K0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9N2K0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.55■□□□□ 0.56
Q9N2K0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9N2K0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.55■□□□□ 0.56
Q9N2K0 KRT8P33-201ENST00000508125 1423 ntBASIC18.55■□□□□ 0.56
Q9N2K0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Q9N2K0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.55■□□□□ 0.56
Q9N2K0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9N2K0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.55■□□□□ 0.56
Q9N2K0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9N2K0 AC139530.1-201ENST00000575312 1977 ntBASIC18.54■□□□□ 0.56
Q9N2K0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.54■□□□□ 0.56
Q9N2K0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.54■□□□□ 0.56
Q9N2K0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9N2K0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.54■□□□□ 0.56
Q9N2K0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9N2K0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9N2K0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9N2K0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Q9N2K0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9N2K0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.53■□□□□ 0.56
Q9N2K0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms