Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TIMP4Q99727 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.4■□□□□ 0.86
TIMP4Q99727 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.4■□□□□ 0.86
TIMP4Q99727 AC135279.3-201ENST00000610945 1311 ntBASIC20.4■□□□□ 0.86
TIMP4Q99727 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TIMP4Q99727 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TIMP4Q99727 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TIMP4Q99727 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TIMP4Q99727 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.39■□□□□ 0.86
TIMP4Q99727 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TIMP4Q99727 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TIMP4Q99727 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.39■□□□□ 0.86
TIMP4Q99727 C17orf82-201ENST00000623772 1530 ntBASIC20.39■□□□□ 0.85
TIMP4Q99727 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TIMP4Q99727 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TIMP4Q99727 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.39■□□□□ 0.85
TIMP4Q99727 AC024257.2-201ENST00000549699 147 ntBASIC20.39■□□□□ 0.85
TIMP4Q99727 AC099791.2-201ENST00000605725 427 ntBASIC20.39■□□□□ 0.85
TIMP4Q99727 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TIMP4Q99727 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.39■□□□□ 0.85
TIMP4Q99727 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TIMP4Q99727 DUSP8P3-201ENST00000399571 1760 ntBASIC20.39■□□□□ 0.85
TIMP4Q99727 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TIMP4Q99727 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TIMP4Q99727 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TIMP4Q99727 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TIMP4Q99727 EP400NL-214ENST00000641289 2402 ntBASIC20.38■□□□□ 0.85
TIMP4Q99727 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP4Q99727 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP4Q99727 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
TIMP4Q99727 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP4Q99727 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.38■□□□□ 0.85
TIMP4Q99727 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP4Q99727 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP4Q99727 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP4Q99727 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP4Q99727 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.38■□□□□ 0.85
TIMP4Q99727 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TIMP4Q99727 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TIMP4Q99727 AC233723.2-201ENST00000623798 2106 ntBASIC20.38■□□□□ 0.85
TIMP4Q99727 SYT6-210ENST00000641643 1587 ntBASIC20.38■□□□□ 0.85
TIMP4Q99727 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TIMP4Q99727 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP4Q99727 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP4Q99727 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TIMP4Q99727 AC092068.2-201ENST00000590491 1708 ntBASIC20.37■□□□□ 0.85
TIMP4Q99727 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP4Q99727 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TIMP4Q99727 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.37■□□□□ 0.85
TIMP4Q99727 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.37■□□□□ 0.85
TIMP4Q99727 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.37■□□□□ 0.85
TIMP4Q99727 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TIMP4Q99727 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.37■□□□□ 0.85
TIMP4Q99727 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP4Q99727 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP4Q99727 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP4Q99727 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TIMP4Q99727 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TIMP4Q99727 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TIMP4Q99727 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TIMP4Q99727 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TIMP4Q99727 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.36■□□□□ 0.85
TIMP4Q99727 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.36■□□□□ 0.85
TIMP4Q99727 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.36■□□□□ 0.85
TIMP4Q99727 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TIMP4Q99727 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.36■□□□□ 0.85
TIMP4Q99727 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
TIMP4Q99727 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.36■□□□□ 0.85
TIMP4Q99727 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TIMP4Q99727 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TIMP4Q99727 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TIMP4Q99727 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TIMP4Q99727 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TIMP4Q99727 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TIMP4Q99727 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.35■□□□□ 0.85
TIMP4Q99727 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TIMP4Q99727 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TIMP4Q99727 AC241377.3-202ENST00000626088 1088 ntBASIC20.35■□□□□ 0.85
TIMP4Q99727 AC241585.3-202ENST00000628937 1088 ntBASIC20.35■□□□□ 0.85
TIMP4Q99727 AC245100.8-202ENST00000629247 1058 ntBASIC20.35■□□□□ 0.85
TIMP4Q99727 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.34■□□□□ 0.85
TIMP4Q99727 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP4Q99727 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP4Q99727 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP4Q99727 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP4Q99727 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP4Q99727 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.34■□□□□ 0.85
TIMP4Q99727 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP4Q99727 C1orf229-201ENST00000623686 2258 ntBASIC20.34■□□□□ 0.85
TIMP4Q99727 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP4Q99727 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP4Q99727 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TIMP4Q99727 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TIMP4Q99727 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TIMP4Q99727 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TIMP4Q99727 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.33■□□□□ 0.85
TIMP4Q99727 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TIMP4Q99727 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TIMP4Q99727 EDA-201ENST00000338901 1233 ntBASIC20.33■□□□□ 0.85
TIMP4Q99727 SERBP1P1-201ENST00000396021 1160 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms