Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00479Q96M42 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00479Q96M42 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00479Q96M42 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LINC00479Q96M42 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00479Q96M42 AC018755.3-202ENST00000596210 929 ntBASIC16.96■□□□□ 0.31
LINC00479Q96M42 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00479Q96M42 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00479Q96M42 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC00479Q96M42 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00479Q96M42 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00479Q96M42 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC00479Q96M42 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC00479Q96M42 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LINC00479Q96M42 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.96■□□□□ 0.3
LINC00479Q96M42 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC00479Q96M42 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC00479Q96M42 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00479Q96M42 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00479Q96M42 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00479Q96M42 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00479Q96M42 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00479Q96M42 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00479Q96M42 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00479Q96M42 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00479Q96M42 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00479Q96M42 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00479Q96M42 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00479Q96M42 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00479Q96M42 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.94■□□□□ 0.3
LINC00479Q96M42 AC026310.3-201ENST00000625186 2373 ntBASIC16.94■□□□□ 0.3
LINC00479Q96M42 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00479Q96M42 AL353803.4-201ENST00000565882 1934 ntBASIC16.94■□□□□ 0.3
LINC00479Q96M42 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00479Q96M42 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00479Q96M42 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00479Q96M42 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00479Q96M42 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LINC00479Q96M42 SPCS2P3-201ENST00000500401 656 ntBASIC16.94■□□□□ 0.3
LINC00479Q96M42 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00479Q96M42 AC087393.1-201ENST00000582896 145 ntBASIC16.94■□□□□ 0.3
LINC00479Q96M42 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00479Q96M42 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00479Q96M42 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00479Q96M42 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00479Q96M42 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00479Q96M42 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00479Q96M42 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00479Q96M42 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC00479Q96M42 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC00479Q96M42 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LINC00479Q96M42 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.93■□□□□ 0.3
LINC00479Q96M42 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
LINC00479Q96M42 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00479Q96M42 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00479Q96M42 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
LINC00479Q96M42 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00479Q96M42 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00479Q96M42 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC00479Q96M42 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00479Q96M42 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00479Q96M42 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00479Q96M42 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LINC00479Q96M42 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00479Q96M42 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00479Q96M42 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00479Q96M42 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LINC00479Q96M42 GPX1-201ENST00000419349 1106 ntBASIC16.92■□□□□ 0.3
LINC00479Q96M42 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00479Q96M42 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC00479Q96M42 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00479Q96M42 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00479Q96M42 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00479Q96M42 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00479Q96M42 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00479Q96M42 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC00479Q96M42 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00479Q96M42 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00479Q96M42 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00479Q96M42 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00479Q96M42 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.91■□□□□ 0.3
LINC00479Q96M42 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00479Q96M42 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00479Q96M42 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00479Q96M42 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.91■□□□□ 0.3
LINC00479Q96M42 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00479Q96M42 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.91■□□□□ 0.3
LINC00479Q96M42 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00479Q96M42 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LINC00479Q96M42 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00479Q96M42 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LINC00479Q96M42 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC00479Q96M42 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00479Q96M42 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC00479Q96M42 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.9■□□□□ 0.3
LINC00479Q96M42 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00479Q96M42 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00479Q96M42 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.9■□□□□ 0.3
LINC00479Q96M42 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00479Q96M42 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms