Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEIL1Q96FI4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.67■□□□□ 0.58
NEIL1Q96FI4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEIL1Q96FI4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.67■□□□□ 0.58
NEIL1Q96FI4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NEIL1Q96FI4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEIL1Q96FI4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEIL1Q96FI4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.66■□□□□ 0.58
NEIL1Q96FI4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEIL1Q96FI4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEIL1Q96FI4 SERBP1P1-201ENST00000396021 1160 ntBASIC18.66■□□□□ 0.58
NEIL1Q96FI4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEIL1Q96FI4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEIL1Q96FI4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.66■□□□□ 0.58
NEIL1Q96FI4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEIL1Q96FI4 AC019069.1-201ENST00000610008 1333 ntBASIC18.66■□□□□ 0.58
NEIL1Q96FI4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEIL1Q96FI4 FP325331.1-202ENST00000623531 1380 ntBASIC18.66■□□□□ 0.58
NEIL1Q96FI4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 ABCB10P4-201ENST00000566803 2184 ntBASIC18.65■□□□□ 0.58
NEIL1Q96FI4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 AC006455.2-201ENST00000429931 906 ntBASIC18.65■□□□□ 0.58
NEIL1Q96FI4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 AC011298.3-201ENST00000615796 283 ntBASIC18.65■□□□□ 0.58
NEIL1Q96FI4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEIL1Q96FI4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NEIL1Q96FI4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NEIL1Q96FI4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.64■□□□□ 0.57
NEIL1Q96FI4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.64■□□□□ 0.57
NEIL1Q96FI4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEIL1Q96FI4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEIL1Q96FI4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.64■□□□□ 0.57
NEIL1Q96FI4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEIL1Q96FI4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEIL1Q96FI4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEIL1Q96FI4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEIL1Q96FI4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NEIL1Q96FI4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEIL1Q96FI4 CLDN5-201ENST00000403084 2357 ntBASIC18.63■□□□□ 0.57
NEIL1Q96FI4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEIL1Q96FI4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEIL1Q96FI4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.63■□□□□ 0.57
NEIL1Q96FI4 AC005837.3-201ENST00000612163 286 ntBASIC18.63■□□□□ 0.57
NEIL1Q96FI4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEIL1Q96FI4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
NEIL1Q96FI4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEIL1Q96FI4 AC144652.1-201ENST00000609974 1624 ntBASIC18.63■□□□□ 0.57
NEIL1Q96FI4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEIL1Q96FI4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEIL1Q96FI4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEIL1Q96FI4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 EDA-201ENST00000338901 1233 ntBASIC18.62■□□□□ 0.57
NEIL1Q96FI4 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 pRNA.6-201ENST00000610482 90 ntBASIC18.62■□□□□ 0.57
NEIL1Q96FI4 pRNA.5-201ENST00000612139 90 ntBASIC18.62■□□□□ 0.57
NEIL1Q96FI4 pRNA.11-201ENST00000618423 90 ntBASIC18.62■□□□□ 0.57
NEIL1Q96FI4 pRNA.13-201ENST00000619112 90 ntBASIC18.62■□□□□ 0.57
NEIL1Q96FI4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.62■□□□□ 0.57
NEIL1Q96FI4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 DUSP8P5-201ENST00000422884 1815 ntBASIC18.61■□□□□ 0.57
NEIL1Q96FI4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 MIR3181-201ENST00000578512 73 ntBASIC18.61■□□□□ 0.57
NEIL1Q96FI4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NEIL1Q96FI4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms