Protein–RNA interactions for Protein: Q92925

SMARCD2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2Q92925 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
SMARCD2Q92925 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCD2Q92925 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
SMARCD2Q92925 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.07■■□□□ 1.28
SMARCD2Q92925 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.06■■□□□ 1.28
SMARCD2Q92925 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCD2Q92925 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCD2Q92925 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCD2Q92925 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCD2Q92925 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCD2Q92925 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCD2Q92925 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.06■■□□□ 1.28
SMARCD2Q92925 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCD2Q92925 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.06■■□□□ 1.28
SMARCD2Q92925 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCD2Q92925 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.05■■□□□ 1.28
SMARCD2Q92925 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SMARCD2Q92925 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
SMARCD2Q92925 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
SMARCD2Q92925 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SMARCD2Q92925 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.05■■□□□ 1.28
SMARCD2Q92925 AC004911.1-201ENST00000416316 871 ntBASIC23.05■■□□□ 1.28
SMARCD2Q92925 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.05■■□□□ 1.28
SMARCD2Q92925 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.05■■□□□ 1.28
SMARCD2Q92925 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SMARCD2Q92925 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.05■■□□□ 1.28
SMARCD2Q92925 AC105233.4-201ENST00000642045 216 ntBASIC23.05■■□□□ 1.28
SMARCD2Q92925 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCD2Q92925 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCD2Q92925 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCD2Q92925 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.05■■□□□ 1.28
SMARCD2Q92925 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.04■■□□□ 1.28
SMARCD2Q92925 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCD2Q92925 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.04■■□□□ 1.28
SMARCD2Q92925 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCD2Q92925 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCD2Q92925 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCD2Q92925 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCD2Q92925 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.04■■□□□ 1.28
SMARCD2Q92925 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCD2Q92925 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.03■■□□□ 1.28
SMARCD2Q92925 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCD2Q92925 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.03■■□□□ 1.28
SMARCD2Q92925 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.03■■□□□ 1.28
SMARCD2Q92925 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.03■■□□□ 1.28
SMARCD2Q92925 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.03■■□□□ 1.28
SMARCD2Q92925 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCD2Q92925 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCD2Q92925 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.02■■□□□ 1.28
SMARCD2Q92925 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCD2Q92925 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCD2Q92925 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.02■■□□□ 1.28
SMARCD2Q92925 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
SMARCD2Q92925 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.02■■□□□ 1.28
SMARCD2Q92925 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SMARCD2Q92925 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.02■■□□□ 1.28
SMARCD2Q92925 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCD2Q92925 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.02■■□□□ 1.28
SMARCD2Q92925 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
SMARCD2Q92925 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.02■■□□□ 1.28
SMARCD2Q92925 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCD2Q92925 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCD2Q92925 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCD2Q92925 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.02■■□□□ 1.28
SMARCD2Q92925 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.02■■□□□ 1.28
SMARCD2Q92925 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
SMARCD2Q92925 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
SMARCD2Q92925 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.01■■□□□ 1.27
SMARCD2Q92925 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCD2Q92925 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.01■■□□□ 1.27
SMARCD2Q92925 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCD2Q92925 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCD2Q92925 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCD2Q92925 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.01■■□□□ 1.27
SMARCD2Q92925 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.01■■□□□ 1.27
SMARCD2Q92925 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.01■■□□□ 1.27
SMARCD2Q92925 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCD2Q92925 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCD2Q92925 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMARCD2Q92925 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMARCD2Q92925 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23■■□□□ 1.27
SMARCD2Q92925 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23■■□□□ 1.27
SMARCD2Q92925 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
SMARCD2Q92925 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SMARCD2Q92925 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SMARCD2Q92925 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMARCD2Q92925 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23■■□□□ 1.27
SMARCD2Q92925 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.99■■□□□ 1.27
SMARCD2Q92925 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMARCD2Q92925 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.99■■□□□ 1.27
SMARCD2Q92925 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMARCD2Q92925 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.99■■□□□ 1.27
SMARCD2Q92925 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMARCD2Q92925 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.98■■□□□ 1.27
SMARCD2Q92925 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMARCD2Q92925 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SMARCD2Q92925 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
SMARCD2Q92925 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SMARCD2Q92925 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.98■■□□□ 1.27
SMARCD2Q92925 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms