Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RPS4Y2Q8TD47 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4Y2Q8TD47 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 AC144652.1-201ENST00000609974 1624 ntBASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.48■□□□□ 0.71
RPS4Y2Q8TD47 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4Y2Q8TD47 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4Y2Q8TD47 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4Y2Q8TD47 DUX4L18-201ENST00000553347 1267 ntBASIC19.47■□□□□ 0.71
RPS4Y2Q8TD47 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RPS4Y2Q8TD47 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4Y2Q8TD47 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4Y2Q8TD47 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4Y2Q8TD47 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4Y2Q8TD47 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4Y2Q8TD47 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.46■□□□□ 0.71
RPS4Y2Q8TD47 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y2Q8TD47 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y2Q8TD47 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RPS4Y2Q8TD47 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.46■□□□□ 0.71
RPS4Y2Q8TD47 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y2Q8TD47 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.46■□□□□ 0.71
RPS4Y2Q8TD47 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RPS4Y2Q8TD47 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y2Q8TD47 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y2Q8TD47 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y2Q8TD47 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.46■□□□□ 0.71
RPS4Y2Q8TD47 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y2Q8TD47 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y2Q8TD47 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RPS4Y2Q8TD47 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.45■□□□□ 0.7
RPS4Y2Q8TD47 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.45■□□□□ 0.7
RPS4Y2Q8TD47 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.45■□□□□ 0.7
RPS4Y2Q8TD47 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.45■□□□□ 0.7
RPS4Y2Q8TD47 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RPS4Y2Q8TD47 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y2Q8TD47 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y2Q8TD47 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y2Q8TD47 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 AC139795.1-202ENST00000500444 432 ntBASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y2Q8TD47 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.43■□□□□ 0.7
RPS4Y2Q8TD47 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms