Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 AC004911.1-201ENST00000416316 871 ntBASIC19.36■□□□□ 0.69
LINC01560Q8TB33 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 AC092437.1-201ENST00000624794 1048 ntBASIC19.36■□□□□ 0.69
LINC01560Q8TB33 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01560Q8TB33 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 KRT18P14-201ENST00000534205 1250 ntBASIC19.35■□□□□ 0.69
LINC01560Q8TB33 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01560Q8TB33 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LINC01560Q8TB33 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.34■□□□□ 0.69
LINC01560Q8TB33 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC01560Q8TB33 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC01560Q8TB33 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LINC01560Q8TB33 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.34■□□□□ 0.69
LINC01560Q8TB33 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.34■□□□□ 0.69
LINC01560Q8TB33 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LINC01560Q8TB33 NTF6G-201ENST00000591094 616 ntBASIC19.34■□□□□ 0.69
LINC01560Q8TB33 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC01560Q8TB33 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LINC01560Q8TB33 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LINC01560Q8TB33 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC01560Q8TB33 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC01560Q8TB33 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.33■□□□□ 0.68
LINC01560Q8TB33 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.33■□□□□ 0.68
LINC01560Q8TB33 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.33■□□□□ 0.68
LINC01560Q8TB33 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.33■□□□□ 0.68
LINC01560Q8TB33 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.33■□□□□ 0.68
LINC01560Q8TB33 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LINC01560Q8TB33 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LINC01560Q8TB33 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LINC01560Q8TB33 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LINC01560Q8TB33 LINC02228-203ENST00000641970 1355 ntBASIC19.32■□□□□ 0.68
LINC01560Q8TB33 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01560Q8TB33 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
LINC01560Q8TB33 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.32■□□□□ 0.68
LINC01560Q8TB33 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01560Q8TB33 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01560Q8TB33 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01560Q8TB33 AP005435.1-201ENST00000529293 1178 ntBASIC19.32■□□□□ 0.68
LINC01560Q8TB33 AC105233.4-201ENST00000642045 216 ntBASIC19.32■□□□□ 0.68
LINC01560Q8TB33 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01560Q8TB33 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01560Q8TB33 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01560Q8TB33 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01560Q8TB33 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC01560Q8TB33 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01560Q8TB33 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.3■□□□□ 0.68
LINC01560Q8TB33 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC01560Q8TB33 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms