Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD2Q8NHY2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD2Q8NHY2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD2Q8NHY2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RFWD2Q8NHY2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD2Q8NHY2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RFWD2Q8NHY2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RFWD2Q8NHY2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RFWD2Q8NHY2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RFWD2Q8NHY2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFWD2Q8NHY2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.91■■□□□ 1.1
RFWD2Q8NHY2 AC026310.3-201ENST00000625186 2373 ntBASIC21.91■■□□□ 1.1
RFWD2Q8NHY2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFWD2Q8NHY2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFWD2Q8NHY2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFWD2Q8NHY2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFWD2Q8NHY2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RFWD2Q8NHY2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RFWD2Q8NHY2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
RFWD2Q8NHY2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFWD2Q8NHY2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFWD2Q8NHY2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RFWD2Q8NHY2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFWD2Q8NHY2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RFWD2Q8NHY2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RFWD2Q8NHY2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RFWD2Q8NHY2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFWD2Q8NHY2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RFWD2Q8NHY2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFWD2Q8NHY2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFWD2Q8NHY2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.9■■□□□ 1.1
RFWD2Q8NHY2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RFWD2Q8NHY2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RFWD2Q8NHY2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.9■■□□□ 1.1
RFWD2Q8NHY2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFWD2Q8NHY2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFWD2Q8NHY2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RFWD2Q8NHY2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFWD2Q8NHY2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFWD2Q8NHY2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFWD2Q8NHY2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFWD2Q8NHY2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFWD2Q8NHY2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFWD2Q8NHY2 AL592293.1-201ENST00000502889 1188 ntBASIC21.89■■□□□ 1.09
RFWD2Q8NHY2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RFWD2Q8NHY2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFWD2Q8NHY2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFWD2Q8NHY2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
RFWD2Q8NHY2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFWD2Q8NHY2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFWD2Q8NHY2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.88■■□□□ 1.09
RFWD2Q8NHY2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.88■■□□□ 1.09
RFWD2Q8NHY2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RFWD2Q8NHY2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.88■■□□□ 1.09
RFWD2Q8NHY2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFWD2Q8NHY2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.88■■□□□ 1.09
RFWD2Q8NHY2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 U85056.1-201ENST00000616429 682 ntBASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RFWD2Q8NHY2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFWD2Q8NHY2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFWD2Q8NHY2 AL353803.4-201ENST00000565882 1934 ntBASIC21.86■■□□□ 1.09
RFWD2Q8NHY2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFWD2Q8NHY2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RFWD2Q8NHY2 SPCS2P3-201ENST00000500401 656 ntBASIC21.86■■□□□ 1.09
RFWD2Q8NHY2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFWD2Q8NHY2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFWD2Q8NHY2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.86■■□□□ 1.09
RFWD2Q8NHY2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFWD2Q8NHY2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFWD2Q8NHY2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RFWD2Q8NHY2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFWD2Q8NHY2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFWD2Q8NHY2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RFWD2Q8NHY2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms