Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM116Q8NCL8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM116Q8NCL8 AL353803.4-201ENST00000565882 1934 ntBASIC17.52■□□□□ 0.4
TMEM116Q8NCL8 ECEL1P1-201ENST00000373592 1742 ntBASIC17.52■□□□□ 0.39
TMEM116Q8NCL8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TMEM116Q8NCL8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM116Q8NCL8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM116Q8NCL8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM116Q8NCL8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM116Q8NCL8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TMEM116Q8NCL8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM116Q8NCL8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.51■□□□□ 0.39
TMEM116Q8NCL8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM116Q8NCL8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM116Q8NCL8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM116Q8NCL8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TMEM116Q8NCL8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM116Q8NCL8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM116Q8NCL8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 LINC00526-201ENST00000581067 1875 ntBASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 CLDN5-201ENST00000403084 2357 ntBASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 RARRES2P1-201ENST00000474487 481 ntBASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 SNX5-217ENST00000606557 1087 ntBASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM116Q8NCL8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM116Q8NCL8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM116Q8NCL8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM116Q8NCL8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM116Q8NCL8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.49■□□□□ 0.39
TMEM116Q8NCL8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM116Q8NCL8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM116Q8NCL8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM116Q8NCL8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM116Q8NCL8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM116Q8NCL8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM116Q8NCL8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM116Q8NCL8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 AC127496.7-201ENST00000625110 1798 ntBASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.48■□□□□ 0.39
TMEM116Q8NCL8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 AC242852.2-201ENST00000615738 1807 ntBASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 AC137630.3-201ENST00000607245 391 ntBASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM116Q8NCL8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms