Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 AC008687.6-201ENST00000596318 630 ntBASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 TPRG1LP1-201ENST00000598702 760 ntBASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 NCF1B-203ENST00000435988 1254 ntBASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 AC133637.1-201ENST00000624115 1537 ntBASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
VPS13BQ7Z7G8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 AL355802.2-201ENST00000402069 882 ntBASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 TMEM191A-211ENST00000637163 1067 ntBASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 MIR4651-201ENST00000582622 73 ntBASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 AL109923.1-201ENST00000618799 583 ntBASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13BQ7Z7G8 AC241377.3-202ENST00000626088 1088 ntBASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 AC241585.3-202ENST00000628937 1088 ntBASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 AL354811.1-201ENST00000610286 706 ntBASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 AL138781.1-201ENST00000566567 1274 ntBASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.87□□□□□ -0.19
VPS13BQ7Z7G8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS13BQ7Z7G8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13BQ7Z7G8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13BQ7Z7G8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13BQ7Z7G8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13BQ7Z7G8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13BQ7Z7G8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13BQ7Z7G8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13BQ7Z7G8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13BQ7Z7G8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS13BQ7Z7G8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13BQ7Z7G8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13BQ7Z7G8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS13BQ7Z7G8 AL050303.2-201ENST00000619798 666 ntBASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 MIR663A-201ENST00000385250 93 ntBASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 DBI-210ENST00000542275 757 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 AC137761.2-201ENST00000561729 223 ntBASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 AC145350.3-201ENST00000569033 163 ntBASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 AC092171.4-201ENST00000609130 632 ntBASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13BQ7Z7G8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 COX20-201ENST00000366528 568 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms