Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 SLC7A5P2-201ENST00000553010 536 ntBASIC15.68■□□□□ 0.1
CSMD3Q7Z407 LSR-205ENST00000427250 1606 ntTSL 2 BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CSMD3Q7Z407 AC098934.4-201ENST00000564127 592 ntBASIC15.67■□□□□ 0.1
CSMD3Q7Z407 AL138781.1-201ENST00000566567 1274 ntBASIC15.67■□□□□ 0.1
CSMD3Q7Z407 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD3Q7Z407 AC008687.6-201ENST00000596318 630 ntBASIC15.66■□□□□ 0.1
CSMD3Q7Z407 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 AC010525.1-201ENST00000585559 441 ntBASIC15.65■□□□□ 0.1
CSMD3Q7Z407 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 AC093827.2-201ENST00000512654 315 ntBASIC15.65■□□□□ 0.1
CSMD3Q7Z407 BID-214ENST00000617586 542 ntTSL 5 BASIC15.65■□□□□ 0.1
CSMD3Q7Z407 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
CSMD3Q7Z407 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 AC006970.2-201ENST00000450065 779 ntBASIC15.64■□□□□ 0.09
CSMD3Q7Z407 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 AC069152.1-201ENST00000438030 544 ntBASIC15.64■□□□□ 0.09
CSMD3Q7Z407 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.64■□□□□ 0.09
CSMD3Q7Z407 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 AP004607.4-201ENST00000530158 1459 ntBASIC15.63■□□□□ 0.09
CSMD3Q7Z407 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 AC011767.1-201ENST00000617410 1153 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms