Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATPAF1Q5TC12 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATPAF1Q5TC12 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATPAF1Q5TC12 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.19■□□□□ 0.66
ATPAF1Q5TC12 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATPAF1Q5TC12 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.18■□□□□ 0.66
ATPAF1Q5TC12 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF1Q5TC12 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 MIR6722-201ENST00000617286 78 ntBASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ATPAF1Q5TC12 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF1Q5TC12 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATPAF1Q5TC12 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.14■□□□□ 0.66
ATPAF1Q5TC12 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATPAF1Q5TC12 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATPAF1Q5TC12 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATPAF1Q5TC12 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.14■□□□□ 0.65
ATPAF1Q5TC12 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATPAF1Q5TC12 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.14■□□□□ 0.65
ATPAF1Q5TC12 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.14■□□□□ 0.65
ATPAF1Q5TC12 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.14■□□□□ 0.65
ATPAF1Q5TC12 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ATPAF1Q5TC12 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATPAF1Q5TC12 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
ATPAF1Q5TC12 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATPAF1Q5TC12 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATPAF1Q5TC12 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATPAF1Q5TC12 GUSBP5-201ENST00000418136 578 ntBASIC19.13■□□□□ 0.65
ATPAF1Q5TC12 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.13■□□□□ 0.65
ATPAF1Q5TC12 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATPAF1Q5TC12 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms